Detail information of GWHGAAEX015513/evm.TU.scaffold_68.30
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|459292748|ref|YP_007515905.1| | 9.00E-99 | NADH-dependent flavin oxidoreductase [Bradyrhizobium oligotrophicum S58] |
| KOG | KOG0134 | 0 | NADH:flavin oxidoreductase/12-oxophytodienoate reductase |
| nr | gi|743822994|ref|XP_010932417.1| | 0 | PREDICTED: 12-oxophytodienoate reductase 7 [Elaeis guineensis] |
| Swissprot | tr|Q6Z965|OPR7_ORYSJ | 0 | 12-oxophytodienoate reductase 7 |
| trEMBL | tr|G3GC11|G3GC11_9ASPA | 0 | 12-oxophytodienoate reductase 3 {ECO:0000313|EMBL:AEO13840.1} |
| TAIR | AT2G06050 | 0 | oxophytodienoate-reductase 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000064 | 1312626 | 1363189 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015513
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00724.19 | Oxidored_FMN | 11 | 356 | 5.60E-81 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05894 | OPR | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0010181 | Molecular Function | FMN binding |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.270 |
| SRR2545915 | Juvenile tuber | 6.420 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.090 |
| SRR5643514 | five period of Gastrodia elata | 14.030 | |
| SRR5643515 | five period of Gastrodia elata | 9.240 | |
| SRR5643524 | five period of Gastrodia elata | 13.710 | |
| SRR5643525 | five period of Gastrodia elata | 11.080 | |
| SRR5643528 | five period of Gastrodia elata | 8.010 | |
| SRR5643658 | five period of Gastrodia elata | 10.400 | |
| SRR5643659 | five period of Gastrodia elata | 18.000 | |
| SRR5643660 | five period of Gastrodia elata | 15.260 | |
| SRR5643661 | five period of Gastrodia elata | 26.120 | |
| SRR5643662 | five period of Gastrodia elata | 20.030 | |
| SRR5643663 | five period of Gastrodia elata | 22.360 | |
| SRR5643664 | five period of Gastrodia elata | 22.090 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.330 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.510 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.370 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.390 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.300 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 8.720 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 7.970 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 17.770 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.010 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 14.410 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 14.410 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 22.97 |
| Juven | Juvenile tuber | 14.46 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.72 | |
| Mother_Juven | Mother tuber of Juvenile | 6.25 |