Gene detail

Detail information of GWHGAAEX015514/evm.TU.scaffold_68.31

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743773670\|ref\|XP_010917185.1\|	0	PREDICTED: uncharacterized protein At1g04910-like [Elaeis guineensis]
Swissprot	tr\|Q8W486\|Y1491_ARATH	2.00E-79	Uncharacterized protein At1g04910
trEMBL	tr\|A0A072USY2\|A0A072USY2_MEDTR	0	GDP-fucose O-fucosyltransferase-like protein {ECO:0000313\|EMBL:KEH32446.1}
TAIR	AT5G35570	0	O-fucosyltransferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000064	1382274	1408191	-

Transcript Sequence
>GWHTAAEX015514 GTCATTATCCCGCAAAATAGAGCTAGTAAGCGCGTTTCAGTCGTTCAGACTTGAAAGCTTCCGGAACGGTCACTAGCTTCTTCTTCTCTCGGCGTCTTCCATCCTATAAATGCTCAGTTAATGGCAACGCGGGTCTCACATCCATTAGAGCAGATTGCCTTTTTTAGATGCATTAAACCAAGAATAATTCAAAAACCCTAGATCCGTAATATCCTGCTCATGGGATTCCAGCAGCTTCATCCCCATCACCCCATCGCCGGCGGCGGTGCTAGCTCGGGAGATGACGTATCCCAAAGCCAGCGAGTGCACAGTCCCAGATACATCGGTTCTATGACGCGCAGAGGCCACTCGTTCAAGCGCTCCAGTGCGAACTGCGGGGAAGTCGAGCTACAGATCAACTCTCCTCGTTCTTCCTCCGGCAGCCCATCGAGCGAGGCAGCCGAGCTCGCAACGTTCTTGCCGGGTTCTCCTGCTGCGGACCGATGGCGCTATGGCCAGGCTCTTCGCTCCCGGTTCGGCATCCAGATTTTGGGAAAAGGCATGTTCAAGGAGCAGGAGGCGGCGCTGCCGTTCAGGGATAAGAGGCGGCTGAGCAATTTTGTGTTCTTGGCATTTTGCGGCGTTTGCTTATTTCTTGGAGTGATGAAGATATTTGCCGGTAATTGGCTGGGCTCTCTCCTATTGGAGATAGCCCTGCGGCACCAGGAATTATCGAATGAAGTGGCCAGTCAGGATGTTGGTTTGTCATCTAGCTATGGAAGTAAAGGAGGGGATAATGACCGATATTTGATGACATTATCAGTGGGTACCGATGATGATCATTATGTACCGGAGCACTCAGAGATCTGGGTCAAGCCAAACAGTGAAAATTTTAAAATATGTATTGAAACATCAAATTTTAGGAAGATTGATGCAACAACAAATGGCTATCTTCTAATTAATGCAAATGGAGGCTTGAATCAAATGAGATTCGGGATCTGTGATATGGTTGCTGTTGCCAAGATTTTGAGAGCCACGCTAGTGCTTCCTTCACTTGATCATACATCGTATTGGGCTGATGCTAGTAATTTCAAGGATCTTTTTGATTGGAAACATTTTATAGAGACCTTAAAGGATGATGTTCATATAATTGAGACTTTACCAGTTGCCCTTAGAGGTGCTGAACCAATTATAAAGACTCCTATATCTTGGTCTAAGGTGAATTATTACAAAACCGATGTCCTCCCTCTGTTGAAACAGCTCAAAGTTTTGTACTTCACTCATACAGACTCTCGGCTTGCTAACAATGGGCTTCCCACTTCCATCCAAAAACTGAGATGCCGAGTAAATTATAAGGCACTTAAATATTCTGCTCCCATTGAACAGTATGGGGCATTCCTAGTATCAAGGATGCGGCAAGAAGGACAGCCATATGTTGCACTTCATTTAAGATACGAGAAGGACATGCTTGCTTTTACCGGTTGCAGCAATAATTTGACCTCAACTGAAGAAGAAGAGCTTCGACAAATGCGATATGAAGTGAGCCATTGGAAGGAGAAAGAGATTGATGGTTCTGAGAGGCGAAGGCAGGGTGGTTGTCCTTTAACTCCATGGGAGACCTCCCTTCTCCTCAAAGGATTGGGATTTCCATCAAGCACTCGCATATATTTGGTGGCTGGTGAAGCCTTTGGACATGGTAGCATGAAGCTTCTTAAAGATGATTTTCCACACATATACACCCATTCATCCTTATCCACAGAAGAGGATCTTGAACCTTTCAGAAACCACCAGAACATGCTTGCTGGGTTGGACTATGTTGTTGCTCTTCAGAGTGATGTTTTTATTTACACGTATGATGGAAATATGGCAAAGGCTGTGCAGGGTCACAGGCGTTTTAAAAACTTCAAGAAAACTATCAATCCAGATAGGGTAAACTTTGTGAAACTTGTTGATGATTTTGACGAAGGTAAGATCTCGTGGAAACAGTTCAGATCGACGGTGAAAAAACTGCACAGAGATCGAGTTGGGGCTCCGTACTACAGGGAGCTCGGCGAAGCCCCCAAGCTGGAAGAATCTTTCTATGCAAATCCACTTCCCGGATGCATTTGCCAAAAAGCCTGAGAGGAAATTAAAGAACCATTGTCTCAAATATTTTACTGCCACTACTACTAAACATAGTTAAATGCCTTGCCAGTGTATTTTTTCATCATAAGTTCATCGCTCATGCTTGAAAGAAAAAACCAGCAATATTTTCAGCAGCCCAGTGCTCAAAATCTATAAGATTGGAGGATTTGCAATTGCGAAATGAAGGAGAAGCTTTGATGAGCATGCGATGTAGAAATCGAACGGCTGCGGATAGCACTAAAATGTAAAGTTTATTTATTGTTATTATTATTTTTTATAGAGACTTTTCTCTTAGCTTTTGTGTGTACAATTGAGAGTCTATCAACTGGATGCTTGTGGGGTATATGAATGTATGATCATTCTTTTTAGTGTGTGAAATAGCTCAATTTACTTTCTTTAATAACACGATAGTAAGTTATATTGGTAGTTGTATGTGTAAACTTTTTTTTGTTATTTTAAACAAATTATATTATCTGTATAAGCCACATCTAGTATTGTGAATTCCTTGGCAGTATGACA

Network for GWHGAAEX015514

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10250.8	O-FucT	237	552	4.90E-72

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT106

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.680
SRP064423	SRR2545915	Juvenile tuber	16.860
SRP108465	SRR5643513	five period of Gastrodia elata	11.880
	SRR5643514	five period of Gastrodia elata	7.630
	SRR5643515	five period of Gastrodia elata	17.220
	SRR5643524	five period of Gastrodia elata	8.590
	SRR5643525	five period of Gastrodia elata	33.810
	SRR5643528	five period of Gastrodia elata	29.730
	SRR5643658	five period of Gastrodia elata	23.660
	SRR5643659	five period of Gastrodia elata	17.860
	SRR5643660	five period of Gastrodia elata	11.900
	SRR5643661	five period of Gastrodia elata	17.880
	SRR5643662	five period of Gastrodia elata	19.790
	SRR5643663	five period of Gastrodia elata	17.530
	SRR5643664	five period of Gastrodia elata	16.360
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.640
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.510
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.880
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.260
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.970
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	7.060
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	8.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.900
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.570
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	12.150
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.450
SRP279888	Gastro	Gastrodia elata tuber	9.93
	Juven	Juvenile tuber	8.19
	Mother_Gastro	Mother tuber of Gastrodia elata	15.04
	Mother_Juven	Mother tuber of Juvenile	16.18