Detail information of GWHGAAEX015518/evm.TU.scaffold_68.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672166339|ref|XP_008803098.1|1.27E-12PREDICTED: transcription factor PCL1-like [Phoenix dactylifera]
Swissprottr|Q94DH3|PCL1_ORYSJ6.00E-09Transcription factor PCL1
trEMBLtr|M0SWD5|M0SWD5_MUSAM6.00E-13Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P07060_001}
TAIRAT3G466406.00E-07Homeodomain-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006415596121571032+
Transcript Sequence

Network for GWHGAAEX015518

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-G2-like

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.080
SRR2545915Juvenile tuber18.430
SRP108465SRR5643513five period of Gastrodia elata34.970
SRR5643514five period of Gastrodia elata46.260
SRR5643515five period of Gastrodia elata43.930
SRR5643524five period of Gastrodia elata51.660
SRR5643525five period of Gastrodia elata23.660
SRR5643528five period of Gastrodia elata57.270
SRR5643658five period of Gastrodia elata25.060
SRR5643659five period of Gastrodia elata28.090
SRR5643660five period of Gastrodia elata30.990
SRR5643661five period of Gastrodia elata38.850
SRR5643662five period of Gastrodia elata25.430
SRR5643663five period of Gastrodia elata25.300
SRR5643664five period of Gastrodia elata29.700
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.160
SRR6049655Rhizomagastrodiae_C368-T10_good_143.430
SRR6049656Rhizomagastrodiae_C368-T07_good_122.120
SRR6049657Rhizomagastrodiae_C368-T07_good_120.390
SRR6049658Rhizomagastrodiae_C368-T04_good_113.560
SRR6049659Rhizomagastrodiae_C368-T04_good_117.310
SRR6049660Rhizomagastrodiae_C368-T01_good_115.690
SRR6049661Rhizomagastrodiae_C368-T04_good_113.050
SRR6049662Rhizomagastrodiae_C368-T01_good_116.110
SRR6049663Rhizomagastrodiae_C368-T01_good_115.850
SRR6049664Rhizomagastrodiae_C368-T10_good_130.200
SRR6049665Rhizomagastrodiae_C368-T10_good_130.200
SRP279888GastroGastrodia elata tuber 29.06
JuvenJuvenile tuber37.11
Mother_GastroMother tuber of Gastrodia elata 42.43
Mother_JuvenMother tuber of Juvenile 52.99