Gene detail

Detail information of GWHGAAEX015532/evm.TU.scaffold_68.62_evm.TU.scaffold_68.68

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|71277763\|ref\|YP_270010.1\|	2.00E-111	serine protease [Colwellia psychrerythraea 34H]
nr	gi\|672138239\|ref\|XP_008792869.1\|	0	PREDICTED: subtilisin-like protease [Phoenix dactylifera]
Swissprot	tr\|O65351\|SUBL_ARATH	0	Subtilisin-like protease (Precursor)
trEMBL	tr\|M1A1D2\|M1A1D2_SOLTU	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400012537}
TAIR	AT3G14067	0	Subtilase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000064	2454636	2522728	+

Transcript Sequence
>GWHTAAEX015532 GAAATGGCGGAAAAAGAGGTTTCCACCCTTCTTTCCTCCATCCTTCTCTTCCTCCTGCTCCCCTACTTCTCCTCATCCCTAACCTACATCGTCCACGTGTCCCCTTCCCTCCGCCCTTCGACTTCCCCTACCCCTTTCCACTGGTACTCCTGCACCCTGCGCTCCCTCCCGCGCCCACTTCGCCGCCCAGCTGCCCGCATCCTCTACACCTACAACCATGTGGCTTCCGGCTTCGCCGCAAGCCTGACTTCCCCTCAGGCCGCAGCCCTCCGCCTCCTCCCCCACGTTCTCGCCGTCGTTCCCGATACCACCCGGTTCCCTCACACAACCCACACCCCCTCCTTCCTCCACCTCTCGACTTCCGCCGGCATCTGGCCCAAATCCTCCTTCGCCTCCTCCACCGTCATCGCCGTCCTCGACACCGGCATCTTCCCCTATTCCCACTCCTTCGTCGACACCAATCTCCCTCCTCCACCCTCCTCCTTCCGCCCTTCCTGCGCCTTCCTCAATTCCTCCTCTTCCCCCTGCAACAGCAAGCTTGTTGGCGCCAAGTTCTTTTTAAAGGGCTACGAATCCGCCATCGGCCACCCCATCAATGAAACCCTTGAATCCAAATCACCCCTTGACATGGATGGCCACGGTTCCCACACCTCCTCCACCGCCGCCGGCGCCTCCGTCCTCGGAGCAAACTTTCTTGACTTTGCCGCCGGCACAGCCGTCGGCATCGCCCCAAAAGCCCGCATCGCCACCTACAAAGTCTGCTGGGAGCAGGGCTGCGCCGACTCCGACATTCTCGCTGCCATGGACGCTGCCGTGGCTGATGGTGCCGACATCATATCCCTCTCTGTCGGTTCCGACAGCCCCCTCCCTGATTACTTCACCGATTCCATCGCCGTCGGTGCCTTCAGGGCTGTCCAGCACGGTGTCCTCGTCTCCTGTTCGGCGGGCAACTCCGGCCCAGAGCCCTCCACCGCCGTCAACATCGCCCCGTGGATACTCACCGTCGGAGCATCCACTGTCGACAGGAGTTTCCCCGCCGACGTCGTCCTCGGCGACGGGAGCCTCCACAACGGCGTCTCCCTTTTTGCCGGCCCGGGCAACATCACCGCTGTCGACCTACCTTTGGTCGACGGCGCGGCCGTCGGCTCCCAGCCGTGCATCATGGATCTCCTCAATTCCTCCGCTGTCGCTGGCAAGATTGTGCTTTGTGAGCGCGGCGGCGAGTCATCCCGGGTCGAGAAGGGGAGCGCCGTGAAGCTCGCCGGGGGAGCTGGCATGATTCTCATGAACACTGACGAGTTTGGGGATGAGCTGATCGCTGATGCACATCTCATCCCGGCAACCATGGTCAGCGCATTTGCCGGAAAGAAGATACGGGAATATATCGCCTCGTCTCCCTCTCCCACCGCCACCATCTTTTTCAGCGGGAACACCGTGTTTGGCAACGACCCGTCGGCGCCGAAGGTCGCAGCATTCTCGAGCCGTGGGCCCAGTAGTCTCACACTGGAGATCCTGAAGCCGGATGTGATTTCTCCTGGGGTCAACATTCTCGCCGCATGGACTGGCGCTACGAGCCCGACGGATCTTGCCGACGATCCGAGGAGGGTTGAATACAACATCATCTCGGGTACGTCGATGGCTTGCCCGCACGTGAGCGGCGTCGCCGCGCTATTGCGAGAGGCGCATCACGATTGGAGCCCGGCGGCCATTAAGTCGGCCATTATGACCACCGCCTATAACCACGATAACACCGGCAAGACCATCCAGGATCTCGCCACGGGGAAGGAATCTACCCCTTTTGATCGGGGAGCCGGTCATGTGGACCCTAACGAGGCCATTAATCCGGGATTGATTTACGACGCCGGAATTGAGGATTACGTCGCCTTCCTCTGTTCTATCAACTACACTGCTGCGCAAATCGCGGTGTTCACGGGGGATGAGGGCGGCACAAATTGCTCGAAGGTGAAGGAGGCGTTGGCAAGCCCTGGAGATTTGAACTACCCCTCCTTCTCCGTCCTCTTCTCTGACCGGAGCAGCGTGGTGAGCAACATAAGAACAGTGAAGAACGTGGGTGGGCTGGATTGCGGGCCCTACGGAAGCTGCAAAGAGGTGTATGATGTGGAGATAGGAAACCCACCGGGTGTGAAGGTGGAGGTCAAACCCAGAAGGCTGGTGTTCGATTCTGTGAACCAGAGTCTGTCTTATGAGATCACCTTTACTAGCTACATTAACGGAACGACAGGGAGCGGGAGTTCGCATCAGTTTGGTTGGATTTGTTGGAGTGATGGAGATCATAAGGTGAGGAGCCCCATTGCCATTATGTGGCGCCAGAGTGAGCTGGTTTCCTCCATGTAAACGCTGTGCAAAGTAGTCTGCATCTTCAATATGATGGGTGGTGTCTGAATAATTTACATGTGCCAAGTTTTCCTCTGACTGTACTGTTTATTATGAGCTTAAACAGAATATATATTTGAGTTGGATGTTATGTTTAGTGCGATAATACTAAATAAAT

Network for GWHGAAEX015532

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module2

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05922.15	Inhibitor_I9	27	104	3.90E-11
PF00082.21	Peptidase_S8	132	584	3.60E-51
PF02225.21	PA	392	457	2.00E-10

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006508	Biological Process	proteolysis
GO:0004252	Molecular Function	serine-type endopeptidase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.400
SRP064423	SRR2545915	Juvenile tuber	5.620
SRP108465	SRR5643513	five period of Gastrodia elata	62.200
	SRR5643514	five period of Gastrodia elata	69.740
	SRR5643515	five period of Gastrodia elata	56.780
	SRR5643524	five period of Gastrodia elata	62.120
	SRR5643525	five period of Gastrodia elata	3.150
	SRR5643528	five period of Gastrodia elata	3.790
	SRR5643658	five period of Gastrodia elata	4.960
	SRR5643659	five period of Gastrodia elata	12.600
	SRR5643660	five period of Gastrodia elata	10.510
	SRR5643661	five period of Gastrodia elata	15.240
	SRR5643662	five period of Gastrodia elata	7.900
	SRR5643663	five period of Gastrodia elata	11.390
	SRR5643664	five period of Gastrodia elata	9.710
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	72.670
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	131.700
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	71.310
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	44.360
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	29.020
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	27.790
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	26.260
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	28.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	74.030
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	49.560
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	133.950
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	133.950
SRP279888	Gastro	Gastrodia elata tuber	9.00
	Juven	Juvenile tuber	5.02
	Mother_Gastro	Mother tuber of Gastrodia elata	25.22
	Mother_Juven	Mother tuber of Juvenile	19.76