Detail information of GWHGAAEX015556/evm.TU.scaffold_68.91
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|317123691|ref|YP_004097803.1| | 1.00E-111 | peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043] |
| nr | gi|743822714|ref|XP_010932346.1| | 0 | PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease [Elaeis guineensis] |
| Swissprot | tr|O65351|SUBL_ARATH | 0 | Subtilisin-like protease (Precursor) |
| trEMBL | tr|A0A059ARI3|A0A059ARI3_EUCGR | 0 | Uncharacterized protein {ECO:0000313|EMBL:KCW56428.1} |
| TAIR | AT3G14240 | 0 | Subtilase family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000064 | 3330248 | 3332711 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015556
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF05922.15 | Inhibitor_I9 | 32 | 101 | 7.90E-08 |
| PF00082.21 | Peptidase_S8 | 125 | 564 | 5.80E-47 |
| PF02225.21 | PA | 366 | 444 | 1.80E-07 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0004252 | Molecular Function | serine-type endopeptidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.270 |
| SRR2545915 | Juvenile tuber | 1.130 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.900 |
| SRR5643514 | five period of Gastrodia elata | 4.590 | |
| SRR5643515 | five period of Gastrodia elata | 2.620 | |
| SRR5643524 | five period of Gastrodia elata | 5.690 | |
| SRR5643525 | five period of Gastrodia elata | 0.770 | |
| SRR5643528 | five period of Gastrodia elata | 1.040 | |
| SRR5643658 | five period of Gastrodia elata | 0.780 | |
| SRR5643659 | five period of Gastrodia elata | 4.020 | |
| SRR5643660 | five period of Gastrodia elata | 3.920 | |
| SRR5643661 | five period of Gastrodia elata | 2.920 | |
| SRR5643662 | five period of Gastrodia elata | 5.960 | |
| SRR5643663 | five period of Gastrodia elata | 5.730 | |
| SRR5643664 | five period of Gastrodia elata | 8.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 8.030 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 14.380 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.590 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.280 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.320 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.850 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.310 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 3.090 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.750 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.230 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.530 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.530 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.60 |
| Juven | Juvenile tuber | 7.82 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.93 | |
| Mother_Juven | Mother tuber of Juvenile | 2.92 |