Detail information of GWHGAAEX015559/evm.TU.scaffold_68.93


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743822588|ref|XP_010932315.1|4.03E-38PREDICTED: protein TIFY 3B-like [Elaeis guineensis]
Swissprottr|Q9C5K8|TIF3B_ARATH4.00E-23Protein TIFY 3B
trEMBLtr|K3Z9Q4|K3Z9Q4_SETIT7.00E-37Uncharacterized protein {ECO:0000313|EnsemblPlants:Si023275m}
TAIRAT5G209001.00E-22jasmonate-zim-domain protein 12

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006434221323458106-
Transcript Sequence

Network for GWHGAAEX015559

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06200.13tify54855.80E-19
PF09425.9CCT_21551805.30E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTify

KEGG pathway

KO Enzyme pathway mapID
K13464JAZ Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms72.010
SRR2545915Juvenile tuber100.740
SRP108465SRR5643513five period of Gastrodia elata76.180
SRR5643514five period of Gastrodia elata98.590
SRR5643515five period of Gastrodia elata87.350
SRR5643524five period of Gastrodia elata94.060
SRR5643525five period of Gastrodia elata191.660
SRR5643528five period of Gastrodia elata216.410
SRR5643658five period of Gastrodia elata219.220
SRR5643659five period of Gastrodia elata63.830
SRR5643660five period of Gastrodia elata75.370
SRR5643661five period of Gastrodia elata61.620
SRR5643662five period of Gastrodia elata53.520
SRR5643663five period of Gastrodia elata56.570
SRR5643664five period of Gastrodia elata62.050
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_167.160
SRR6049655Rhizomagastrodiae_C368-T10_good_1109.770
SRR6049656Rhizomagastrodiae_C368-T07_good_173.120
SRR6049657Rhizomagastrodiae_C368-T07_good_177.340
SRR6049658Rhizomagastrodiae_C368-T04_good_159.680
SRR6049659Rhizomagastrodiae_C368-T04_good_170.870
SRR6049660Rhizomagastrodiae_C368-T01_good_172.720
SRR6049661Rhizomagastrodiae_C368-T04_good_170.190
SRR6049662Rhizomagastrodiae_C368-T01_good_165.210
SRR6049663Rhizomagastrodiae_C368-T01_good_174.060
SRR6049664Rhizomagastrodiae_C368-T10_good_177.990
SRR6049665Rhizomagastrodiae_C368-T10_good_177.990
SRP279888GastroGastrodia elata tuber 106.75
JuvenJuvenile tuber98.69
Mother_GastroMother tuber of Gastrodia elata 251.28
Mother_JuvenMother tuber of Juvenile 206.83