Detail information of GWHGAAEX015568/evm.TU.scaffold_68.108


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672169003|ref|XP_008804521.1|3.18E-53PREDICTED: CASP-like protein VIT_01s0010g01870 [Phoenix dactylifera]
Swissprottr|Q0JEF7|CSPLA_ORYSJ2.00E-52CASP-like protein 2A1
trEMBLtr|W5BFF0|W5BFF0_WHEAT3.00E-51CASP-like protein {ECO:0000256|RuleBase:RU361233}
TAIRAT1G172009.00E-42Uncharacterised protein family (UPF0497)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006438485423857685-
Transcript Sequence

Network for GWHGAAEX015568

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04535.11DUF588161491.10E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.090
SRR2545915Juvenile tuber1.270
SRP108465SRR5643513five period of Gastrodia elata2.600
SRR5643514five period of Gastrodia elata2.320
SRR5643515five period of Gastrodia elata1.400
SRR5643524five period of Gastrodia elata2.800
SRR5643525five period of Gastrodia elata32.240
SRR5643528five period of Gastrodia elata2.730
SRR5643658five period of Gastrodia elata6.100
SRR5643659five period of Gastrodia elata2.440
SRR5643660five period of Gastrodia elata0.270
SRR5643661five period of Gastrodia elata0.090
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.880
SRR6049655Rhizomagastrodiae_C368-T10_good_11.030
SRR6049656Rhizomagastrodiae_C368-T07_good_14.770
SRR6049657Rhizomagastrodiae_C368-T07_good_14.350
SRR6049658Rhizomagastrodiae_C368-T04_good_13.210
SRR6049659Rhizomagastrodiae_C368-T04_good_12.660
SRR6049660Rhizomagastrodiae_C368-T01_good_11.820
SRR6049661Rhizomagastrodiae_C368-T04_good_17.350
SRR6049662Rhizomagastrodiae_C368-T01_good_19.570
SRR6049663Rhizomagastrodiae_C368-T01_good_12.340
SRR6049664Rhizomagastrodiae_C368-T10_good_12.060
SRR6049665Rhizomagastrodiae_C368-T10_good_12.060
SRP279888GastroGastrodia elata tuber 0.03
JuvenJuvenile tuber1.24
Mother_GastroMother tuber of Gastrodia elata 0.10
Mother_JuvenMother tuber of Juvenile 0.66