Detail information of GWHGAAEX015578/evm.TU.scaffold_68.123


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|698497702|ref|XP_009794806.1|1.71E-34PREDICTED: dof zinc finger protein DOF1.5-like [Nicotiana sylvestris]
Swissprottr|O22967|CDF4_ARATH1.00E-32Cyclic dof factor 4
trEMBLtr|W1PZP4|W1PZP4_AMBTC3.00E-34Uncharacterized protein {ECO:0000313|EMBL:ERN13888.1}
TAIRAT2G341404.00E-32Dof-type zinc finger DNA-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006443466074348881-
Transcript Sequence

Network for GWHGAAEX015578

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof45993.40E-31
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms59.170
SRR2545915Juvenile tuber29.220
SRP108465SRR5643513five period of Gastrodia elata18.210
SRR5643514five period of Gastrodia elata9.070
SRR5643515five period of Gastrodia elata8.200
SRR5643524five period of Gastrodia elata5.290
SRR5643525five period of Gastrodia elata91.670
SRR5643528five period of Gastrodia elata46.300
SRR5643658five period of Gastrodia elata89.900
SRR5643659five period of Gastrodia elata28.930
SRR5643660five period of Gastrodia elata59.160
SRR5643661five period of Gastrodia elata29.040
SRR5643662five period of Gastrodia elata105.880
SRR5643663five period of Gastrodia elata103.050
SRR5643664five period of Gastrodia elata191.970
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.990
SRR6049655Rhizomagastrodiae_C368-T10_good_134.200
SRR6049656Rhizomagastrodiae_C368-T07_good_126.110
SRR6049657Rhizomagastrodiae_C368-T07_good_149.220
SRR6049658Rhizomagastrodiae_C368-T04_good_145.110
SRR6049659Rhizomagastrodiae_C368-T04_good_143.900
SRR6049660Rhizomagastrodiae_C368-T01_good_132.800
SRR6049661Rhizomagastrodiae_C368-T04_good_134.420
SRR6049662Rhizomagastrodiae_C368-T01_good_113.650
SRR6049663Rhizomagastrodiae_C368-T01_good_122.640
SRR6049664Rhizomagastrodiae_C368-T10_good_116.220
SRR6049665Rhizomagastrodiae_C368-T10_good_116.220
SRP279888GastroGastrodia elata tuber 68.19
JuvenJuvenile tuber34.84
Mother_GastroMother tuber of Gastrodia elata 47.80
Mother_JuvenMother tuber of Juvenile 35.26