Detail information of GWHGAAEX015587/evm.TU.scaffold_68.135


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|146298365|ref|YP_001192956.1|8.00E-08two component regulator [Flavobacterium johnsoniae UW101]
nrgi|414592178|tpg|DAA42749.1|1.38E-94TPA: putative leucine-rich repeat protein kinase family protein [Zea mays]
Swissprottr|C0LGQ9|Y4294_ARATH4.00E-55Probable LRR receptor-like serine/threonine-protein kinase At4g20940
trEMBLtr|A0A096QBX9|A0A096QBX9_MAIZE5.00E-95Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G034572_P02}
TAIRAT4G209401.00E-54Leucine-rich receptor-like protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006445740884575988-
Transcript Sequence

Network for GWHGAAEX015587

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13516.5LRR_61191340.91
PF13516.5LRR_61982111.2
PF13516.5LRR_62482591
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.720
SRR2545915Juvenile tuber0.240
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.070
SRR5643528five period of Gastrodia elata0.150
SRR5643658five period of Gastrodia elata0.170
SRR5643659five period of Gastrodia elata0.190
SRR5643660five period of Gastrodia elata0.270
SRR5643661five period of Gastrodia elata0.210
SRR5643662five period of Gastrodia elata0.270
SRR5643663five period of Gastrodia elata0.210
SRR5643664five period of Gastrodia elata0.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.400
SRR6049655Rhizomagastrodiae_C368-T10_good_10.310
SRR6049656Rhizomagastrodiae_C368-T07_good_10.500
SRR6049657Rhizomagastrodiae_C368-T07_good_10.250
SRR6049658Rhizomagastrodiae_C368-T04_good_10.580
SRR6049659Rhizomagastrodiae_C368-T04_good_10.380
SRR6049660Rhizomagastrodiae_C368-T01_good_10.620
SRR6049661Rhizomagastrodiae_C368-T04_good_10.630
SRR6049662Rhizomagastrodiae_C368-T01_good_10.520
SRR6049663Rhizomagastrodiae_C368-T01_good_10.720
SRR6049664Rhizomagastrodiae_C368-T10_good_10.260
SRR6049665Rhizomagastrodiae_C368-T10_good_10.260
SRP279888GastroGastrodia elata tuber 0.22
JuvenJuvenile tuber0.02
Mother_GastroMother tuber of Gastrodia elata 0.08
Mother_JuvenMother tuber of Juvenile 0.13