Detail information of GWHGAAEX015593/evm.TU.scaffold_68.142


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|694402562|ref|XP_009376269.1|9.29E-20PREDICTED: mini zinc finger protein 2 [Pyrus x bretschneideri]
Swissprottr|Q2Q493|MIF3_ARATH4.00E-19Mini zinc finger protein 3
trEMBLtr|D7KH74|D7KH74_ARALL7.00E-20Putative uncharacterized protein {ECO:0000313|EMBL:EFH69277.1}
TAIRAT1G144401.00E-16homeobox protein 31

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006447363254736793+
Transcript Sequence

Network for GWHGAAEX015593

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04770.11ZF-HD_dimer21662.90E-23
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors Familyzf-HD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.940
SRR2545915Juvenile tuber1.640
SRP108465SRR5643513five period of Gastrodia elata6.250
SRR5643514five period of Gastrodia elata7.360
SRR5643515five period of Gastrodia elata2.900
SRR5643524five period of Gastrodia elata6.410
SRR5643525five period of Gastrodia elata43.490
SRR5643528five period of Gastrodia elata46.150
SRR5643658five period of Gastrodia elata96.480
SRR5643659five period of Gastrodia elata0.910
SRR5643660five period of Gastrodia elata3.290
SRR5643661five period of Gastrodia elata2.040
SRR5643662five period of Gastrodia elata4.130
SRR5643663five period of Gastrodia elata0.960
SRR5643664five period of Gastrodia elata2.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.020
SRR6049655Rhizomagastrodiae_C368-T10_good_18.770
SRR6049656Rhizomagastrodiae_C368-T07_good_110.050
SRR6049657Rhizomagastrodiae_C368-T07_good_18.080
SRR6049658Rhizomagastrodiae_C368-T04_good_110.450
SRR6049659Rhizomagastrodiae_C368-T04_good_111.600
SRR6049660Rhizomagastrodiae_C368-T01_good_18.750
SRR6049661Rhizomagastrodiae_C368-T04_good_14.900
SRR6049662Rhizomagastrodiae_C368-T01_good_110.630
SRR6049663Rhizomagastrodiae_C368-T01_good_112.930
SRR6049664Rhizomagastrodiae_C368-T10_good_113.570
SRR6049665Rhizomagastrodiae_C368-T10_good_113.570
SRP279888GastroGastrodia elata tuber 3.62
JuvenJuvenile tuber4.74
Mother_GastroMother tuber of Gastrodia elata 25.80
Mother_JuvenMother tuber of Juvenile 8.18