Detail information of GWHGAAEX015595/evm.TU.scaffold_68.143


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|296132316|ref|YP_003639563.1|1.00E-07serine/threonine protein kinase [Thermincola potens JR]
KOGKOG11871.00E-40Serine/threonine protein kinase
nrgi|449461283|ref|XP_004148371.1|1.96E-44PREDICTED: probable receptor-like protein kinase At5g47070-like [Cucumis sativus]
Swissprottr|Q9LTC0|Y5707_ARATH3.00E-41Probable receptor-like protein kinase At5g47070
trEMBLtr|A0A0A0LFA0|A0A0A0LFA0_CUCSA7.00E-45Uncharacterized protein {ECO:0000313|EMBL:KGN60448.1}
TAIRAT5G470701.00E-40Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006447495344755563+
Transcript Sequence

Network for GWHGAAEX015595

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase471055.30E-13
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.940
SRP108465SRR5643513five period of Gastrodia elata1.110
SRR5643514five period of Gastrodia elata0.440
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.440
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata1.150
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.440
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.490
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.620
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.630
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.570
SRR6049661Rhizomagastrodiae_C368-T04_good_10.690
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_12.570
SRR6049665Rhizomagastrodiae_C368-T10_good_12.570
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.74