Detail information of GWHGAAEX015598/evm.TU.scaffold_688.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21975.00E-156Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins
nrgi|672135874|ref|XP_008791616.1|1.41E-177PREDICTED: uncharacterized protein LOC103708463 isoform X2 [Phoenix dactylifera]
trEMBLtr|K3ZRX6|K3ZRX6_SETIT9.00E-174Uncharacterized protein {ECO:0000313|EnsemblPlants:Si029356m}
TAIRAT3G493505.00E-156Ypt/Rab-GAP domain of gyp1p superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000684844512882-
Transcript Sequence

Network for GWHGAAEX015598

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00566.17RabGAP-TBC2273471.70E-30
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.580
SRR2545915Juvenile tuber5.980
SRP108465SRR5643513five period of Gastrodia elata10.350
SRR5643514five period of Gastrodia elata8.670
SRR5643515five period of Gastrodia elata10.560
SRR5643524five period of Gastrodia elata9.240
SRR5643525five period of Gastrodia elata10.250
SRR5643528five period of Gastrodia elata7.900
SRR5643658five period of Gastrodia elata7.260
SRR5643659five period of Gastrodia elata10.080
SRR5643660five period of Gastrodia elata9.180
SRR5643661five period of Gastrodia elata11.180
SRR5643662five period of Gastrodia elata10.050
SRR5643663five period of Gastrodia elata9.570
SRR5643664five period of Gastrodia elata11.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.670
SRR6049655Rhizomagastrodiae_C368-T10_good_110.960
SRR6049656Rhizomagastrodiae_C368-T07_good_110.300
SRR6049657Rhizomagastrodiae_C368-T07_good_19.370
SRR6049658Rhizomagastrodiae_C368-T04_good_18.660
SRR6049659Rhizomagastrodiae_C368-T04_good_18.200
SRR6049660Rhizomagastrodiae_C368-T01_good_18.360
SRR6049661Rhizomagastrodiae_C368-T04_good_18.970
SRR6049662Rhizomagastrodiae_C368-T01_good_18.070
SRR6049663Rhizomagastrodiae_C368-T01_good_18.440
SRR6049664Rhizomagastrodiae_C368-T10_good_112.220
SRR6049665Rhizomagastrodiae_C368-T10_good_112.220
SRP279888GastroGastrodia elata tuber 6.15
JuvenJuvenile tuber8.61
Mother_GastroMother tuber of Gastrodia elata 12.63
Mother_JuvenMother tuber of Juvenile 7.12