Detail information of GWHGAAEX015601/evm.TU.scaffold_69.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108805992|ref|YP_645929.1|2.00E-09protein translocase subunit yidC [Rubrobacter xylanophilus DSM 9941]
KOGKOG12392.00E-114Inner membrane protein translocase involved in respiratory chain assembly
nrgi|743884554|ref|XP_010909717.1|0PREDICTED: ALBINO3-like protein 2, chloroplastic isoform X1 [Elaeis guineensis]
Swissprottr|Q0WUC5|ALB33_ARATH9.00E-128ALBINO3-like protein 3, mitochondrial (Precursor)
trEMBLtr|W1PFC7|W1PFC7_AMBTC5.00E-149Uncharacterized protein {ECO:0000313|EMBL:ERN06341.1}
TAIRAT1G650802.00E-114Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000085119403185668+
Transcript Sequence

Network for GWHGAAEX015601

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02096.1960KD_IMP1413401.20E-07
PF13181.5TPR_85065350.0088
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.150
SRR2545915Juvenile tuber19.190
SRP108465SRR5643513five period of Gastrodia elata21.970
SRR5643514five period of Gastrodia elata21.960
SRR5643515five period of Gastrodia elata21.310
SRR5643524five period of Gastrodia elata20.960
SRR5643525five period of Gastrodia elata10.120
SRR5643528five period of Gastrodia elata6.710
SRR5643658five period of Gastrodia elata9.730
SRR5643659five period of Gastrodia elata26.350
SRR5643660five period of Gastrodia elata26.400
SRR5643661five period of Gastrodia elata27.250
SRR5643662five period of Gastrodia elata26.900
SRR5643663five period of Gastrodia elata28.140
SRR5643664five period of Gastrodia elata28.060
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.180
SRR6049655Rhizomagastrodiae_C368-T10_good_118.710
SRR6049656Rhizomagastrodiae_C368-T07_good_118.260
SRR6049657Rhizomagastrodiae_C368-T07_good_120.850
SRR6049658Rhizomagastrodiae_C368-T04_good_117.660
SRR6049659Rhizomagastrodiae_C368-T04_good_120.050
SRR6049660Rhizomagastrodiae_C368-T01_good_120.990
SRR6049661Rhizomagastrodiae_C368-T04_good_118.330
SRR6049662Rhizomagastrodiae_C368-T01_good_119.050
SRR6049663Rhizomagastrodiae_C368-T01_good_120.250
SRR6049664Rhizomagastrodiae_C368-T10_good_123.030
SRR6049665Rhizomagastrodiae_C368-T10_good_123.030
SRP279888GastroGastrodia elata tuber 37.37
JuvenJuvenile tuber32.68
Mother_GastroMother tuber of Gastrodia elata 27.79
Mother_JuvenMother tuber of Juvenile 29.71