Detail information of GWHGAAEX015604/evm.TU.scaffold_69.9
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|326798668|ref|YP_004316487.1| | 5.00E-82 | alpha,alpha-trehalase [Sphingobacterium sp. 21] |
| KOG | KOG0602 | 0 | Neutral trehalase |
| nr | gi|672159587|ref|XP_008799558.1| | 0 | PREDICTED: probable trehalase isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q9FWC1|TRE_ORYSJ | 0 | Probable trehalase |
| trEMBL | tr|M0SRU6|M0SRU6_MUSAM | 0 | Trehalase {ECO:0000256|RuleBase:RU361180} |
| TAIR | AT4G24040 | 0 | trehalase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000085 | 391590 | 396618 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015604
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01204.17 | Trehalase | 60 | 574 | 1.40E-158 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01194 | TREH, treA, treF | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Starch and sucrose metabolism | map00500 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005991 | Biological Process | trehalose metabolic process |
| GO:0004555 | Molecular Function | alpha,alpha-trehalase activity |
| GO:0003824 | Molecular Function | catalytic activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.940 |
| SRR2545915 | Juvenile tuber | 3.010 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 61.280 |
| SRR5643514 | five period of Gastrodia elata | 43.690 | |
| SRR5643515 | five period of Gastrodia elata | 56.590 | |
| SRR5643524 | five period of Gastrodia elata | 21.020 | |
| SRR5643525 | five period of Gastrodia elata | 1.600 | |
| SRR5643528 | five period of Gastrodia elata | 2.770 | |
| SRR5643658 | five period of Gastrodia elata | 1.300 | |
| SRR5643659 | five period of Gastrodia elata | 0.180 | |
| SRR5643660 | five period of Gastrodia elata | 0.070 | |
| SRR5643661 | five period of Gastrodia elata | 0.200 | |
| SRR5643662 | five period of Gastrodia elata | 0.030 | |
| SRR5643663 | five period of Gastrodia elata | 0.080 | |
| SRR5643664 | five period of Gastrodia elata | 0.030 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 775.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 953.130 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 572.930 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 260.440 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 474.800 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 569.170 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 159.340 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 348.390 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1107.930 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 574.940 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1705.330 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1705.330 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.16 |
| Juven | Juvenile tuber | 0.04 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 19.37 | |
| Mother_Juven | Mother tuber of Juvenile | 29.10 |