Detail information of GWHGAAEX015606/evm.TU.scaffold_69.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31428.00E-50Prenylated rab acceptor 1
nrgi|743791574|ref|XP_010923472.1|1.12E-86PREDICTED: PRA1 family protein F3-like [Elaeis guineensis]
Swissprottr|Q9C889|PR1F2_ARATH2.00E-50PRA1 family protein F2
trEMBLtr|M0TFK0|M0TFK0_MUSAM2.00E-80Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P07600_001}
TAIRAT1G551908.00E-50PRA1 (Prenylated rab acceptor) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000085660215661488-
Transcript Sequence

Network for GWHGAAEX015606

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03208.18PRA1371774.50E-48
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.490
SRR2545915Juvenile tuber45.770
SRP108465SRR5643513five period of Gastrodia elata53.030
SRR5643514five period of Gastrodia elata40.330
SRR5643515five period of Gastrodia elata50.070
SRR5643524five period of Gastrodia elata38.990
SRR5643525five period of Gastrodia elata93.130
SRR5643528five period of Gastrodia elata89.280
SRR5643658five period of Gastrodia elata89.340
SRR5643659five period of Gastrodia elata62.340
SRR5643660five period of Gastrodia elata58.180
SRR5643661five period of Gastrodia elata74.670
SRR5643662five period of Gastrodia elata65.010
SRR5643663five period of Gastrodia elata67.010
SRR5643664five period of Gastrodia elata62.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_145.410
SRR6049655Rhizomagastrodiae_C368-T10_good_171.850
SRR6049656Rhizomagastrodiae_C368-T07_good_152.910
SRR6049657Rhizomagastrodiae_C368-T07_good_143.770
SRR6049658Rhizomagastrodiae_C368-T04_good_142.020
SRR6049659Rhizomagastrodiae_C368-T04_good_143.400
SRR6049660Rhizomagastrodiae_C368-T01_good_141.090
SRR6049661Rhizomagastrodiae_C368-T04_good_145.160
SRR6049662Rhizomagastrodiae_C368-T01_good_146.160
SRR6049663Rhizomagastrodiae_C368-T01_good_140.720
SRR6049664Rhizomagastrodiae_C368-T10_good_148.730
SRR6049665Rhizomagastrodiae_C368-T10_good_148.730
SRP279888GastroGastrodia elata tuber 48.02
JuvenJuvenile tuber53.76
Mother_GastroMother tuber of Gastrodia elata 49.11
Mother_JuvenMother tuber of Juvenile 41.56