Detail information of GWHGAAEX015609/evm.TU.scaffold_69.19


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427737591|ref|YP_007057135.1|0phosphoglucomutase [Rivularia sp. PCC 7116]
KOGKOG06250Phosphoglucomutase
nrgi|743774290|ref|XP_010917497.1|0PREDICTED: phosphoglucomutase, cytoplasmic 2-like [Elaeis guineensis]
Swissprottr|P93804|PGMC1_MAIZE0Phosphoglucomutase, cytoplasmic 1
trEMBLtr|A0A059D6N7|A0A059D6N7_EUCGR0Uncharacterized protein {ECO:0000313|EMBL:KCW86257.1}
TAIRAT1G707300Phosphoglucomutase/phosphomannomutase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008512238641289368-
Transcript Sequence

Network for GWHGAAEX015609

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02878.15PGM_PMM_I171647.30E-33
PF02879.15PGM_PMM_II2003092.30E-13
PF02880.15PGM_PMM_III3174402.60E-29
PF00408.19PGM_PMM_IV4825463.00E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01835pgm Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Galactose metabolismmap00052
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520
Purine metabolismmap00230
Streptomycin biosynthesismap00521

Gene Ontology

GO term OntologyName
GO:0071704Biological Processorganic substance metabolic process
GO:0005975Biological Processcarbohydrate metabolic process
GO:0016868Molecular Functionintramolecular transferase activity, phosphotransferases
GO:0000287Molecular Functionmagnesium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms94.290
SRR2545915Juvenile tuber131.150
SRP108465SRR5643513five period of Gastrodia elata132.440
SRR5643514five period of Gastrodia elata215.770
SRR5643515five period of Gastrodia elata170.680
SRR5643524five period of Gastrodia elata209.640
SRR5643525five period of Gastrodia elata70.820
SRR5643528five period of Gastrodia elata137.650
SRR5643658five period of Gastrodia elata61.920
SRR5643659five period of Gastrodia elata106.200
SRR5643660five period of Gastrodia elata107.140
SRR5643661five period of Gastrodia elata33.550
SRR5643662five period of Gastrodia elata145.100
SRR5643663five period of Gastrodia elata143.180
SRR5643664five period of Gastrodia elata121.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1236.690
SRR6049655Rhizomagastrodiae_C368-T10_good_1227.160
SRR6049656Rhizomagastrodiae_C368-T07_good_1233.070
SRR6049657Rhizomagastrodiae_C368-T07_good_1167.510
SRR6049658Rhizomagastrodiae_C368-T04_good_1138.710
SRR6049659Rhizomagastrodiae_C368-T04_good_1120.800
SRR6049660Rhizomagastrodiae_C368-T01_good_1101.380
SRR6049661Rhizomagastrodiae_C368-T04_good_1155.270
SRR6049662Rhizomagastrodiae_C368-T01_good_1185.550
SRR6049663Rhizomagastrodiae_C368-T01_good_1133.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1290.610
SRR6049665Rhizomagastrodiae_C368-T10_good_1290.610
SRP279888GastroGastrodia elata tuber 130.86
JuvenJuvenile tuber95.73
Mother_GastroMother tuber of Gastrodia elata 47.94
Mother_JuvenMother tuber of Juvenile 67.02