Detail information of GWHGAAEX015610/evm.TU.scaffold_69.22
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|146298365|ref|YP_001192956.1| | 4.00E-22 | two component regulator [Flavobacterium johnsoniae UW101] |
| nr | gi|743800773|ref|XP_010926113.1| | 0 | PREDICTED: probable inactive receptor kinase At1g48480 [Elaeis guineensis] |
| Swissprot | tr|Q9LP77|Y1848_ARATH | 0 | Probable inactive receptor kinase At1g48480 (Precursor) |
| trEMBL | tr|I1KQM2|I1KQM2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G06020.1} |
| TAIR | AT1G48480 | 0 | receptor-like kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000085 | 1351617 | 1353832 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015610
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08263.11 | LRRNT_2 | 32 | 65 | 1.40E-06 |
| PF00069.24 | Pkinase | 325 | 568 | 2.00E-23 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_LRR-III |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.700 |
| SRR2545915 | Juvenile tuber | 6.210 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.140 |
| SRR5643514 | five period of Gastrodia elata | 17.690 | |
| SRR5643515 | five period of Gastrodia elata | 13.660 | |
| SRR5643524 | five period of Gastrodia elata | 10.960 | |
| SRR5643525 | five period of Gastrodia elata | 12.620 | |
| SRR5643528 | five period of Gastrodia elata | 20.110 | |
| SRR5643658 | five period of Gastrodia elata | 13.060 | |
| SRR5643659 | five period of Gastrodia elata | 11.070 | |
| SRR5643660 | five period of Gastrodia elata | 8.750 | |
| SRR5643661 | five period of Gastrodia elata | 8.820 | |
| SRR5643662 | five period of Gastrodia elata | 6.910 | |
| SRR5643663 | five period of Gastrodia elata | 9.470 | |
| SRR5643664 | five period of Gastrodia elata | 7.190 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 14.860 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 19.140 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.990 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 11.610 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.620 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 9.490 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.550 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 10.550 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.150 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 8.030 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 24.340 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 24.340 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.95 |
| Juven | Juvenile tuber | 4.47 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.34 | |
| Mother_Juven | Mother tuber of Juvenile | 6.27 |