Detail information of GWHGAAEX015612/evm.TU.scaffold_69.29


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|352681945|ref|YP_004892469.1|3.00E-12GTPase [Thermoproteus tenax Kra 1]
KOGKOG24847.00E-108GTPase
nrgi|672157568|ref|XP_008798499.1|3.71E-138PREDICTED: guanine nucleotide-binding protein-like 3 homolog isoform X1 [Phoenix dactylifera]
Swissprottr|Q9M8Z5|NSN1_ARATH2.00E-108Guanine nucleotide-binding protein-like NSN1 {ECO:0000305}
trEMBLtr|A0A061DNE0|A0A061DNE0_THECC6.00E-129GTP-binding family protein {ECO:0000313|EMBL:EOX93957.1}
TAIRAT3G070507.00E-108GTP-binding family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008517207781726741+
Transcript Sequence

Network for GWHGAAEX015612

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08701.10GN3L_Grn116912.30E-17
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K14538NUG1, GNL3 Ribosome biogenesis in eukaryotes map03008

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.590
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.080
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.180
SRR5643658five period of Gastrodia elata0.470
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.400
SRR5643661five period of Gastrodia elata0.160
SRR5643662five period of Gastrodia elata0.550
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.400
SRR6049655Rhizomagastrodiae_C368-T10_good_12.630
SRR6049656Rhizomagastrodiae_C368-T07_good_10.590
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_11.150
SRR6049659Rhizomagastrodiae_C368-T04_good_11.440
SRR6049660Rhizomagastrodiae_C368-T01_good_10.870
SRR6049661Rhizomagastrodiae_C368-T04_good_11.800
SRR6049662Rhizomagastrodiae_C368-T01_good_10.550
SRR6049663Rhizomagastrodiae_C368-T01_good_10.970
SRR6049664Rhizomagastrodiae_C368-T10_good_12.990
SRR6049665Rhizomagastrodiae_C368-T10_good_12.990
SRP279888GastroGastrodia elata tuber 0.16
JuvenJuvenile tuber0.70
Mother_GastroMother tuber of Gastrodia elata 0.04
Mother_JuvenMother tuber of Juvenile 0.33