Detail information of GWHGAAEX015626/evm.TU.scaffold_69.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34304.00E-50Dynein light chain type 1
nrgi|672178560|ref|XP_008809414.1|7.31E-71PREDICTED: uncharacterized protein LOC103721127 [Phoenix dactylifera]
Swissprottr|Q39580|DYL1_CHLRE4.00E-21Dynein 8 kDa light chain, flagellar outer arm
trEMBLtr|M0TGY8|M0TGY8_MUSAM3.00E-62Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P12500_001}
TAIRAT1G232204.00E-50Dynein light chain type 1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008547808294814900-
Transcript Sequence

Network for GWHGAAEX015626

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01221.17Dynein_light691531.30E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10418DYNLL Vasopressin-regulated water reabsorption map04962

Gene Ontology

GO term OntologyName
GO:0007017Biological Processmicrotubule-based process
GO:0030286Cellular Componentdynein complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms117.340
SRR2545915Juvenile tuber101.800
SRP108465SRR5643513five period of Gastrodia elata69.210
SRR5643514five period of Gastrodia elata57.710
SRR5643515five period of Gastrodia elata62.370
SRR5643524five period of Gastrodia elata58.430
SRR5643525five period of Gastrodia elata146.220
SRR5643528five period of Gastrodia elata110.140
SRR5643658five period of Gastrodia elata111.600
SRR5643659five period of Gastrodia elata125.980
SRR5643660five period of Gastrodia elata161.930
SRR5643661five period of Gastrodia elata138.460
SRR5643662five period of Gastrodia elata150.570
SRR5643663five period of Gastrodia elata145.920
SRR5643664five period of Gastrodia elata179.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_158.300
SRR6049655Rhizomagastrodiae_C368-T10_good_122.660
SRR6049656Rhizomagastrodiae_C368-T07_good_150.880
SRR6049657Rhizomagastrodiae_C368-T07_good_147.350
SRR6049658Rhizomagastrodiae_C368-T04_good_138.620
SRR6049659Rhizomagastrodiae_C368-T04_good_146.010
SRR6049660Rhizomagastrodiae_C368-T01_good_140.040
SRR6049661Rhizomagastrodiae_C368-T04_good_138.960
SRR6049662Rhizomagastrodiae_C368-T01_good_165.870
SRR6049663Rhizomagastrodiae_C368-T01_good_155.250
SRR6049664Rhizomagastrodiae_C368-T10_good_165.770
SRR6049665Rhizomagastrodiae_C368-T10_good_165.770
SRP279888GastroGastrodia elata tuber 150.32
JuvenJuvenile tuber74.23
Mother_GastroMother tuber of Gastrodia elata 94.50
Mother_JuvenMother tuber of Juvenile 72.79