Gene detail

Detail information of GWHGAAEX015627/evm.TU.scaffold_7.3

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1021	0	Acetylglucosaminyltransferase EXT1/exostosin 1
nr	gi\|695037110\|ref\|XP_009406036.1\|	0	PREDICTED: uncharacterized protein LOC103989028 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q6NMM8\|F8H_ARATH	9.00E-33	Probable glucuronoxylan glucuronosyltransferase F8H
trEMBL	tr\|A0A067DRB7\|A0A067DRB7_CITSI	0	Uncharacterized protein {ECO:0000313\|EMBL:KDO45383.1}
TAIR	AT3G57630	0	exostosin family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	48974	108849	+

Transcript Sequence
>GWHTAAEX015627 CTAATCAAAATCCATGTATGGAATCATGCAATATCAGTTCAAACCCGCGTATCCAAGCTTGGCGCCGGCACCCCCATTAACCATCTCTCACGTTCTCCTCCTCAATTATCTCTCTATTTAATGTCGATAATGCCATTCTTCTCTTTTATCAATTCCAAATCCCTCAGTATGAAACTTTCTTATTTTCTGCACTTGTTGCAAGCGCAGATTTTGCGCTTCCCTTCTATTTTCAATGATTTCCAACGTGCTAGATTTGTTCCATTTCATCTCGAACGATAGTGACAATTCATTTTTTTCATTTTAGTTGTTCCCCTCTGGGATTTTGCTCCTGTTTCATTTTACTAGTTGCCAAGAATAAGGGTTTTGCAAAGTTGCTGATGTTTTGATTGATTTTGTATCATCAAGAGTCGACTTTATCCTAAAAAACATTAGGTGAGAATGGTTTCACTCCAATCTCCAAAATGCTCATGGACTTTGGTGGCGATTGCGAGTTCTCTAATGGTGGTGGTCTCGGCGGTGCATTGGTTCCTCACGCCTATTTTTCCTCCTTCGCTGGATTACTTTGGTGCTTGGCGTGCACAGAATTTAGGGAACTCTTCTGTTGATTCTTCAACTGGGAGAGAAAGTTATAAAAATTTGGATCTAGATATTGATTTTGATGCTCTATTTCCTGTGGATTCTCATGGGGCAGTGACATATAGTGGCGTCCCATGGAAGCCTGAGATTGGAAAGTGGCTTTCTGGCTGTGATTCTATCTCCAAGGAAGTTGACATTGTTGAGATCATAGGTAGCAGGAGTTGCAAGAATGACTGTAGTGGTAAAGGTGTATGCAATAGAGGCACAGGACAATGCCGGTGCTTTCATGGCTATTCAGGTGAAGGATGCTCTGAGAGTTTGCAATTTGATTGCAATCTTCCCTCATCAGCTGAGAAACCATATGGTCCATGGCTTGTTTCTACATGTCCTGCTTATTGTGATAAAACTAGAGCTATGTGCTTTTGTGGAGAAGGGTCGAAGTATCCAAATAGGCCAGTTGCTGAAGCTTGTGGATTTAAAATAAACGCACCTTCAGAGCATGGGGGACCTAAGATTGCTGATTGGTCAAAAGATGATTTGGAAAATATTTATACCACCAACAGAAGCAGATTTGGCTGGTGTAATGTTGACCCTGCGGAAGCATACTCCAACAAAGTGAAGTTCAAAGAAGAGTGTGACTGTAAATTTGATGGCCTTTGGGGAAGATTTTGTGATATACCGACAATATGTACTTGTGTAAATCAATGCTCAGGGCGTGGGTATTGCCGTGGGGGAGCTTGCCAGTGTAACCGAGGCTGGTATGGAATCGATTGCAGTATTCCATCTATCTTATCACCTATAACAGAATGGCCTCTTTGGCTAAGACCATCAACAATTGAGCTACCAGATAAGGAAATTTTAGATAGTGACTTTATGGGTATTAAAGCTGTTGTAAAAAAGAAGAGACCTCTTATATATGTGTATGATCTGCCACCAGAATTTAATAGTCATCTTCTTGAGGGTAGGCATTTCAAATTTGAGTGTGTAAACAGAATATACTCAGATAAGAATAGAACGTTGTGGACCCCTCAGTTATACGGCGCACAGATGGCATTTTATGAGAGCATTCTAGCAACCTCTCATCGAACATTGAATGGTGAAGAAGCGGACTATTTTTTTGTTCCAGTTCTTGATGCATGCTTAATATCTCGGGCTGATGATGCACCTCATTTAAGTTTGCGGGGACATTTGGGTCTCAGAAGTTCCTTGACCCTAGACTTCTATAAAAAAGTTTATGAATATATTGCTTATCATTACCCATACTGGAACCGTACATCTGGAAGGGATCATATTTGGTTCTTTGCATGGGATGAAGGTGCCTGCTATGCTCCAAAGGAAATTTGGAACAGTATGATGTTAGTTCATTGGGGGAATACAAACTCAAAACACAACCATTCAACAACATCTTATTGGGGCGATACCTGGGATGGTATTTCTCCTCATAGAAGAGGTAGCCATCCGTGCTTTGATCCGGAGAAAGATATTGTGCTTCCTTCTTGGAAGATGCCTGAACCTGGTTTCGTATGGCTAAAATCATGGGCTAGTCATCGGATGAAAAGAACTACACTATTTTACTTCAATGGGAATTTAGGTTCTTCTTATCATAATGGTCGGCCAGAGGACACATACAGTATGGGCATTAGGCAGAAGCTAGCTGCAGAGTTTGGTTCTACTCCCAATAAAATGGGAAAATTTGGGAGACAGTATACCCCTAACGTTGTTGTAACTTCACTGCGCTCTTCTAAATATTTTGAGGAATTGGCAAGCTCTGTTTTCTGTGGTGTTCTTCCTGGAGATGGCTGGAGTGGCCGTATGGAAGATAGCATTCTCCAGGGATGTGTTCCTGTGATAATTCAGGATGGAATTTTTTTGCCATATGAGAATGTACTTAATTTTAAGAGTTTTGTTGTTCGCGTCTCTGAAGACGAAATTCCAAATTTGGTTAAGATTCTTCAGGAGATCAATGAGACAGAAGTGGAGTTCATGTTGACAAATGTACGTCAGATATGGAAAAGATTCTTGTATCTTGACTCTATTTTGCTTGAAGCTCAGAGGCAAAGGAGTTTGTTTTATGATGATGAAGATTGGGTGGTTGAATTTTCAAAGTTAGGTGAAGATGATGTGTTTTCCACATTCATACAGATATTACACTATAAAATGCACAATGAACCATGGAGGCAACATCTTAAACCCAAGAACAACTATGGCATACCAAATTCTTGCTTGAAAAGGGCTTCATGAAGCTAAGCGCATGGAAAATGATCACAAACTAACTCAGTTACCGCAGAATCTCTGCAGGAAAGGGCCTATTTCAAAATTCTTAAGTGTGCGTTGCCAACAACTGTGCGAGGTAATTTGATGGGTTGAAGGCAGTTCGCGTGTGTATAAAGTGTTATCATCTATAGTAGTGGCAAGCAAATTGCTTTTTACTTAATGAAGTATAATCAATTCTTTCATTGTATAGAAGTGACTATCAAAACCATTTTGTAACGTTGTAATATTCGAGTGAGCTTTTTCTTTTTTTATTAAAAAAGGATTTTTGTTTATGCTTCTGTTATAGTATACATTTATTAAATGCCATGCTATAATTTGGATCATTACTCCATAAATGTGCTT

Network for GWHGAAEX015627

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03016.14	Exostosin	346	700	1.00E-81

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT47

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	1.370
SRP064423	SRR2545915	Juvenile tuber	2.320
SRP108465	SRR5643513	five period of Gastrodia elata	3.040
	SRR5643514	five period of Gastrodia elata	3.390
	SRR5643515	five period of Gastrodia elata	2.660
	SRR5643524	five period of Gastrodia elata	3.300
	SRR5643525	five period of Gastrodia elata	3.960
	SRR5643528	five period of Gastrodia elata	3.560
	SRR5643658	five period of Gastrodia elata	3.560
	SRR5643659	five period of Gastrodia elata	1.800
	SRR5643660	five period of Gastrodia elata	2.020
	SRR5643661	five period of Gastrodia elata	2.160
	SRR5643662	five period of Gastrodia elata	1.840
	SRR5643663	five period of Gastrodia elata	2.650
	SRR5643664	five period of Gastrodia elata	1.640
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.280
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.610
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	1.700
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	1.530
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.190
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.740
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.670
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.090
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.090
SRP279888	Gastro	Gastrodia elata tuber	1.77
	Juven	Juvenile tuber	2.21
	Mother_Gastro	Mother tuber of Gastrodia elata	2.58
	Mother_Juven	Mother tuber of Juvenile	2.70