Gene detail

Detail information of GWHGAAEX015633/evm.TU.scaffold_7.13

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|108802877\|ref\|YP_642814.1\|	2.00E-30	serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
KOG	KOG0032	0	Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
nr	gi\|472178208\|gb\|AGI21023.1\|	0	calcium-dependent protein kinase 3 [Dendrobium catenatum]
Swissprot	tr\|Q42438\|CDPK8_ARATH	0	Calcium-dependent protein kinase 8
trEMBL	tr\|W8CMD4\|W8CMD4_9ASPA	0	Calcium-dependent protein kinase 3 {ECO:0000313\|EMBL:AGI21023.1}
TAIR	AT5G19450	0	calcium-dependent protein kinase 19

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	598238	608983	+

Transcript Sequence
>GWHTAAEX015633 ATCACATAAATTTGAAGGACAATTTTACCCATTCGCGAGGGCACATAGGGTATTTGTTCTTCCTACAATCAGAAGAGCTGCCGTGTATGATATAAGGCAACTTGCGTAGCTTCTGTGAAAAGGGCGGAGCCTTTTTCTAATCACAAACTTAAAATTGAACGATTATTTAAAAAAAGCATAATCTAGAAATTTGTTCATAGCGACTTCAAAATTTGAAGTCAAATTAAGGAAGGATTGATTGCCATGATTGAGGTTGACTCTGGCACCACCACCGTTATGTCCGATTCAAACATGTCTGCAACCCCCCTTCTTTCATCTCATTCTCCCCCCCTCTCCCATGTCTTGCCCTTCCTATTATACTTTTCACTCCTCTAAATTTCTCTTTGGGCTCGCAGACGCAGAAACATTTGTTCTTTAGATCCTTCTTGACGAGCAATCTCAACTTCCACCTCTTTAGTTTTCTTGCTTCTCGAGCTCCAATTAGTCTACCTTCGTTTAATCTTGAAACAAACCTTCTGAATCCCTTTTGCTTCTCCTGATCCCTGAACGAAACACCATAAAATTTGAAACCTAGTAACCGTCTGAGATCTTGAATCAGCATGGGAAACTGCTGCATGCGGCCGGTTAATTCTTCTGATAAGGAGGTGAAGTCGAAAAAAAAGGAGAAGCCGAACCCTTTCTCCGTGGACTATCACCGAGCTCCCATCGCCGGCACGCCGAAGCTCGTGGTGCTCAAGGACCCCACCGGTCGAGACATCGGCAGCCGGTACGAGATTGGAGACGAGCTGGGAAGAGGGGAGTTCGGGATCACTTATCTCTGTACCGATAAAGATACGAGGGAGAATTTTGCATGCAAATCCATCTCCAAGAAGAAACTGAGGACTGCGGTTGATATCGAGGACGTGCGGCGTGAGGTCGATATCATGAGGCATTTGCCTGTGCATCCCAATATTGTGACACTTAAAGATACTTTTGAAGACGAAGAAGCCGTTCATCTTGTGATGGAACTTTGTAAGGGCGGAGAACTTTTTGATAGGATTGTTGCTAGAGGGCACTATAGTGAGAGGGCGGCTGCTGCTGTCACGAAGACTATTGTTGAGGTTGTTCAGGTTTGTCACAAGCATGGGGTAATGCATCGTGACCTAAAACCTGAGAACTTTTTGTTTGCTAATACAAAGGAAACCGCTGCACTGAAATCAATTGATTTTGGTTTGTCTGTATTTTTCAGATCGGGTGAACGCTTTACTGAGATTGTTGGAAGTCCTTATTACATGGCTCCAGAGGTTTTAAAGCGCAATTATGGCCCAGAAGTTGATGTATGGAGTGCTGGAGTTATACTATACATCTTGCTTTGCGGTGTTCCACCATTCTGGGCTGAAACTGAGCAGGGGGTTGCACAGGCAATTATTCGTTCTGTGATTGATTTTAAAAGAGAACCTTGGCCTAAAGTTTCTGAAAGTGCTAAAGATCTTGTTAAAAAGATGCTTGATCCAGAACCTAGGCGTCGCTTAACAGCTCAAGAAGTTCTAGATCATCCTTGGTTGCAGAATGCCAAAACGGCTCCAAATGTTAATCTTGGCGAAACCGTACGAGCCAGACTTCAACAGTTTTCTCTGATGAACAAGTTCAAAAAGAGAGCTCTCAGAGTAGTTGCCGAACATTTGTCCGTGGAAGAAGTTGCAGATATAAAGCTCATGTTTGAGAAGATGGACGTAAACAGAAAAGGAAGGATCACATTGGAAGAGCTGAAGTTTGGACTTCATAAGCTTGGGCACCAGATTCCTGATGCAGATGTCCAGATACTTATGGAAGCTGCTGATGTTGATGGGGATGGAACCCTAGAGTATGGAGAGTTCGTGGCTCTATCAATTCATCTGAAGAAGTTGGGAAATGATGAACATTTGCATAAAGCCTTTGCTTACTTTGATCAGAACAAGAGCGGCTACATCGAAATTGAAGAGCTGAGCCAGTCTCTTGCCGATGATTTGGGTCCTAACCACGAGGAAGTGATCAATGCCATTATCCACGATGTTGATACTGACAAGGATGGTAGAATCAGTTATGAGGAATTTGCGGTTATGATGAAGGCCGGAACAGATTGGAGGAAGGCGTCGAGGCAGTATTCACGTGAACGGTTCACTAGCCTTAGCTTGCACCTGATGAAGGATGGTTCATTGCAGCTAAATAATGAAGGTCGATGAACCTGGATTGTTTATCTCATATTTGGGCGTCGTGTAGAAATCCTTTGTTTTTCCAATCTAGTCAAGCGATTCATTGGCCATTTTCTCTGGTTAGAAATGATATTCTTTTTCTGCTTGCTCTTCATCACTTTGGTTATGTTCTTGTGGGGATGTGGGATGAAAGGAAATATATAGAAAGCAAGCTGTATATATGTATTGTTCCACGAGAGCTTGACGGTGGTATGAAAATATTCATTATTCTGCTTGCCAACTTTGCATTGGTGCCATAGCTTTTACCGAGCTCTTTTCCATGCCCACCTGTTCCTTTGTTTGGTCAAACTGTTGAGATAACTTTAAACGGTTGTTCTGCTACTAGTTTAATTACTTGTAAAACTTTATTTTGTAAAATAATGTTTGTTGGAGTGGCTCCAATAGAATGGATAAGACTAGAGAATGTTGACATTTAGATTATTTGATCATATCAAGCCATTATTACACATGATATTTTATATTTATTTTAAAATTTTTGTTGCATTTACATTATCATATACACATTAAAATGAG

Network for GWHGAAEX015633

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	57	315	7.20E-77
PF13499.5	EF-hand_7	362	422	1.60E-07
PF13499.5	EF-hand_7	433	496	1.60E-12

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CDPK

KEGG pathway

KO	Enzyme	pathway	mapID
K13412	CPK	Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity
GO:0005509	Molecular Function	calcium ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	47.260
SRP064423	SRR2545915	Juvenile tuber	37.890
SRP108465	SRR5643513	five period of Gastrodia elata	31.600
	SRR5643514	five period of Gastrodia elata	21.250
	SRR5643515	five period of Gastrodia elata	30.010
	SRR5643524	five period of Gastrodia elata	28.270
	SRR5643525	five period of Gastrodia elata	30.720
	SRR5643528	five period of Gastrodia elata	66.270
	SRR5643658	five period of Gastrodia elata	22.110
	SRR5643659	five period of Gastrodia elata	24.010
	SRR5643660	five period of Gastrodia elata	22.800
	SRR5643661	five period of Gastrodia elata	31.920
	SRR5643662	five period of Gastrodia elata	25.680
	SRR5643663	five period of Gastrodia elata	19.010
	SRR5643664	five period of Gastrodia elata	27.430
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	34.750
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	21.940
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	32.820
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	34.580
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	32.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	41.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	40.080
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	34.850
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	30.490
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	39.140
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	33.010
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	33.010
SRP279888	Gastro	Gastrodia elata tuber	24.52
	Juven	Juvenile tuber	19.23
	Mother_Gastro	Mother tuber of Gastrodia elata	171.08
	Mother_Juven	Mother tuber of Juvenile	90.54