Detail information of GWHGAAEX015634/evm.TU.scaffold_7.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672138009|ref|XP_008792746.1|2.25E-50PREDICTED: membrane-anchored ubiquitin-fold protein 1 [Phoenix dactylifera]
Swissprottr|Q75GT2|MUB1_ORYSJ1.00E-49Membrane-anchored ubiquitin-fold protein 1 (Precursor)
trEMBLtr|K4AGS6|K4AGS6_SETIT2.00E-49Uncharacterized protein {ECO:0000313|EnsemblPlants:Si038083m}
TAIRAT1G220506.00E-39membrane-anchored ubiquitin-fold protein 6 precursor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000005703784736253+
Transcript Sequence

Network for GWHGAAEX015634

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13881.5Rad60-SLD_261172.00E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.410
SRR2545915Juvenile tuber48.730
SRP108465SRR5643513five period of Gastrodia elata33.740
SRR5643514five period of Gastrodia elata35.670
SRR5643515five period of Gastrodia elata34.510
SRR5643524five period of Gastrodia elata33.660
SRR5643525five period of Gastrodia elata58.140
SRR5643528five period of Gastrodia elata57.400
SRR5643658five period of Gastrodia elata48.500
SRR5643659five period of Gastrodia elata29.630
SRR5643660five period of Gastrodia elata30.550
SRR5643661five period of Gastrodia elata33.900
SRR5643662five period of Gastrodia elata36.550
SRR5643663five period of Gastrodia elata35.140
SRR5643664five period of Gastrodia elata34.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_123.960
SRR6049655Rhizomagastrodiae_C368-T10_good_138.230
SRR6049656Rhizomagastrodiae_C368-T07_good_127.090
SRR6049657Rhizomagastrodiae_C368-T07_good_123.750
SRR6049658Rhizomagastrodiae_C368-T04_good_123.760
SRR6049659Rhizomagastrodiae_C368-T04_good_125.180
SRR6049660Rhizomagastrodiae_C368-T01_good_123.360
SRR6049661Rhizomagastrodiae_C368-T04_good_125.260
SRR6049662Rhizomagastrodiae_C368-T01_good_128.550
SRR6049663Rhizomagastrodiae_C368-T01_good_127.210
SRR6049664Rhizomagastrodiae_C368-T10_good_134.350
SRR6049665Rhizomagastrodiae_C368-T10_good_134.350
SRP279888GastroGastrodia elata tuber 40.83
JuvenJuvenile tuber20.82
Mother_GastroMother tuber of Gastrodia elata 26.03
Mother_JuvenMother tuber of Juvenile 13.42