Detail information of GWHGAAEX015654/evm.TU.scaffold_7.49
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|556569374|ref|YP_008737799.1| | 4.00E-19 | serine/threonine protein kinase [Actinoplanes friuliensis DSM 7358] |
| KOG | KOG0584 | 0 | Serine/threonine protein kinase |
| nr | gi|672168647|ref|XP_008804330.1| | 0 | PREDICTED: probable serine/threonine-protein kinase WNK1 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q0D598|WNK1_ORYSJ | 0 | Probable serine/threonine-protein kinase WNK1 |
| trEMBL | tr|I1QEG8|I1QEG8_ORYGL | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA07G0251000.1} |
| TAIR | AT3G04910 | 0 | with no lysine (K) kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 2328403 | 2332261 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015654
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 26 | 280 | 1.00E-49 |
| PF12202.7 | OSR1_C | 376 | 430 | 1.40E-06 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | WNK_NRBP |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004674 | Molecular Function | protein serine/threonine kinase activity |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 23.750 |
| SRR2545915 | Juvenile tuber | 28.480 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 17.080 |
| SRR5643514 | five period of Gastrodia elata | 22.340 | |
| SRR5643515 | five period of Gastrodia elata | 24.120 | |
| SRR5643524 | five period of Gastrodia elata | 24.650 | |
| SRR5643525 | five period of Gastrodia elata | 2.060 | |
| SRR5643528 | five period of Gastrodia elata | 2.490 | |
| SRR5643658 | five period of Gastrodia elata | 1.520 | |
| SRR5643659 | five period of Gastrodia elata | 22.450 | |
| SRR5643660 | five period of Gastrodia elata | 16.500 | |
| SRR5643661 | five period of Gastrodia elata | 22.730 | |
| SRR5643662 | five period of Gastrodia elata | 18.760 | |
| SRR5643663 | five period of Gastrodia elata | 19.930 | |
| SRR5643664 | five period of Gastrodia elata | 16.010 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.800 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 25.440 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.680 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 14.480 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.380 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.840 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 13.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 38.770 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.130 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 27.770 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 27.770 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 7.56 |
| Juven | Juvenile tuber | 9.52 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.34 | |
| Mother_Juven | Mother tuber of Juvenile | 6.50 |