Gene detail

Detail information of GWHGAAEX015657/evm.TU.scaffold_7.59

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1470	4.00E-119	Phosphatidylinositol transfer protein PDR16 and related proteins
nr	gi\|695015123\|ref\|XP_009394417.1\|	8.37E-162	PREDICTED: random slug protein 5-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|F4IHJ0\|SFH8_ARATH	5.00E-11	Phosphatidylinositol/phosphatidylcholine transfer protein SFH8
trEMBL	tr\|M0SIX9\|M0SIX9_MUSAM	3.00E-162	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P29630_001}
TAIR	AT3G22410	4.00E-119	Sec14p-like phosphatidylinositol transfer family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	2767585	2771583	-

Transcript Sequence
>GWHTAAEX015657 AAGAAAACTAAAATGATGAAAAAGAAAAAGAGACGCTGCTGTTACATCTCGCCGTCAGGCATCCAAGGGGAGAAACTCTGCCCAGAACGGGCACCGTCAGTGCCGCCGCTTTTATAAATAGAGCCAAATTCTCCAAACTCTCAGCAGCCCTACTCTTCTTCTGATATATTCCCTCTGCCATCCCCCAACAAAATTGAGCTTAAACCGCACTGTCAGCTTTTGTTAGGGCTCGGAGCAAGTTATGGGATCCGAGAAGAAGGATCTAGAGCGGATTGAATCTGTTCTGGGAATTTTGAAGAAACAAGCTCCTCCTCTTTCAGTGAAGCAGGAGAAGTTCTGCAATGATGCCTGCATCGAACGGTTCCTAAACGCGAGGGGAGGGAATGCGAAGAAGGCGGCGAAGCATCTCCGATCGGTTCTCTCTTGGAGAGAAGCCATAGGCACCGAGCATTTAATAGCGGATGAGTTCTCTGCTGAACTGGCAGACGGCGCGGCCTATGTGTCAGGCAATGACGACGAGGGTCGTCCAGTAGTGATTTTCCGGCTAAAGCAGGACTACCCCAAATTCCACTCTCAAAAATCGTTTGTTCGGCTGCTGGTGTTCACATTAGAAGTTGCAATCTCCACCATGTCAAGATTTGTGGACCAATTCGTTCTCCTCTTTGATGCAAGATTTTTCAGATCATCGCCGGCTTTTCTAAACGTCTTTTTATGCACGCTGAAGATCGTCGGCCAATATTATCCCGGTCGACTGCACAGAGCTTTCGTCGTCGACCCTCACTCGCTTTTCAATTATCTATGGAAGGGAGCTCGGGGCTTCGTGGATCTAGGGTCATCAACGGCTGTGATTTCATCCGGAGAGATGGAAGGCGGTGGAGAGGAGGGGGGGAAACTGAGCTGCCAACCCCGCGCAAAGTCTCTTCGGTTGGAAGGTTCCCCGAAGGTGGGGACAACCAGCTCGGCTTCGTCCAGATTCTCCTTCACCGTCTCCCACTTCGACTCCCTAAAGCCATGGTACCTAAGCACTGCCCCCAATCCCCGCGCCGCCGTCGCCCCGGCAAGCCCCTACCTCGCCGCCCCTGCTCACCTCTCCGCCAGGTCCCATTCGGTTGCCTCGCCGGCGGTGCGGTGCGCTCCTGGCCGGAAGGATCTGCCGACGCCCGCCACGGCGATGCCGAGGACTCCCATGCCTTCGTTCCTGCAGTCGCCTGCGTCGCGGCTGTTCCGGTTCAAGAAGGAAGCGAGAGGCGGAGGCGGCAGCAGGGCGGCGCGTGACAGGGAAGCCTTCGCTCCCTTTCTGAGGTTCTATAGGCTGCCGTATGATGAGATGGAGTACAGAGGAAAAATGAAGGCGCCGCTCGGCGGGCTAGTCTCCATCGTGTCCCCGGCCGTGAGGATTCAGCGGCGGCACCACCAGAGGATTTAGTTACAGCCGACCCAGCCCATGTGTCTTGTTATTCGTAAATCATATTAGTTTGTGTGGAAATAAGGGATGGCCTAAGCCTAATTGCTGGGCTAAATAATAATTGTCAATATATCGAGTTTGTTTTGTGACATACGTAAGGCAATCCATTTGATTTGAAATAAAACAACTATGAGACGGTAGTTGCCAATAGCAGCTGCTGTCAGCAGGCAGCAACAGCCCAACGGCAGCACCAGCAGCAACTCCCAATGACCTTTTCTCAAGTGGCTCACAGAATACCTTTTTAAATTGCAAATTTGATTTGAAAATTTTTAAGAAAAATATTACTTTTAGC

Network for GWHGAAEX015657

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00650.19	CRAL_TRIO	80	195	5.10E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	49.540
SRP064423	SRR2545915	Juvenile tuber	56.120
SRP108465	SRR5643513	five period of Gastrodia elata	34.040
	SRR5643514	five period of Gastrodia elata	21.020
	SRR5643515	five period of Gastrodia elata	24.030
	SRR5643524	five period of Gastrodia elata	30.290
	SRR5643525	five period of Gastrodia elata	108.990
	SRR5643528	five period of Gastrodia elata	82.160
	SRR5643658	five period of Gastrodia elata	171.730
	SRR5643659	five period of Gastrodia elata	10.640
	SRR5643660	five period of Gastrodia elata	9.470
	SRR5643661	five period of Gastrodia elata	11.050
	SRR5643662	five period of Gastrodia elata	14.890
	SRR5643663	five period of Gastrodia elata	36.890
	SRR5643664	five period of Gastrodia elata	25.350
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	10.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.550
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	13.210
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	16.780
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	34.530
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	50.600
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.750
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	46.250
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	21.200
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.950
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.780
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.780
SRP279888	Gastro	Gastrodia elata tuber	43.63
	Juven	Juvenile tuber	6.74
	Mother_Gastro	Mother tuber of Gastrodia elata	125.30
	Mother_Juven	Mother tuber of Juvenile	19.52