Gene detail

Detail information of GWHGAAEX015658/evm.TU.scaffold_7.62

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|225630609\|ref\|YP_002727400.1\|	3.00E-70	chaperone protein, DnaK [Wolbachia sp. wRi]
KOG	KOG0101	0	Molecular chaperones HSP70/HSC70, HSP70 superfamily
nr	gi\|743886315\|ref\|XP_010910113.1\|	0	PREDICTED: heat shock 70 kDa protein 8 [Elaeis guineensis]
Swissprot	tr\|Q9SKY8\|HSP7H_ARATH	0	Heat shock 70 kDa protein 8
trEMBL	tr\|M0U1N3\|M0U1N3_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P19260_001}
TAIR	AT2G32120	0	heat-shock protein 70T-2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	3218801	3236301	+

Transcript Sequence
>GWHTAAEX015658 GTCTGAAGGTGTGTCGGTACACGTGTCGCCAGTGGCTGCACAGCTAGGCCACAGCCCGTCGAGGTGTTTCCAGACCTTCATCGCATTTCTATATAGTTCAAGATCCTGTTCTCTTCACCGATTTTATCGGCTGAAACGGCTTGAAGTTCTTCGTCGTCACTGTCGAGCAACCAGTGCTCTTTCGGTCTTTTCATTTTGGCTTGTGTATGCTTGTTGTAGGTGGAGCAGCTGCATTTCCGTGGAAGACAGATTGCTGCTTCTTAGGATGGCGGATCAAACCTACACTGTGGCATATGATGGCGAAACAAGTGCTGAGGAGAGTGCTAAATCCCTTCCTCCCGAAATTGCGATTGGTATAGACATAGGGACGTCTAAATGCGGTGTTGCCATCTGGAATGGTTCAAGAGTGGAACTTCTTCGAAATGCACACAATCAAAAGTTGATTCGTTCGTATGTCTTTTTGGGAGAAGAAACGACTTCAGGAGTGCGTGCTCATGGAGATCTGGAAATCTTTTCAGGGAGCGCAGTATTTAACATGAAACGGTTAATTGGAAGAATGGATACCGACCCAATTGTTCATGCCTGCAAGAGTCTTCCTTTTATGGTACAGACCCTGGGCATTGGTGTCAGGCCATTCATTGCTGCACTGGTAAATAACGTTTGGAGAGCCACCACTCCGGAAGAAGTATTTGCAACATTCCTAGCTGAATTAAAAGAAATGGCGGAACGGCAGCTCAAGAGGCCGATACGGAATGCGGTGCTGACCGTTCCCGTCTCATTTAGCAGAGTTCAGCTGACTAGGATTGAGCGTGTTTGTGCAATGGCTGGCATACAGGCCTTCAGGCTGATGCCGGAGCCTACTGCCGTCGCACTTCTGTATGCACAGCAGCAGCAGCAGATTATTCACGAGAACATGGGAAGCGGCATTGAAAAGGTTGCGCTTATATTTGGCATGGGCGCAGGGTACTGCGATGTTGCTATAACTGCAACAGCTGGGGGAGTTTCCCAGATTAAGGCATTGTCAGGAAGCCCTCTCGGCGGTGAGGATATACTAAATAATATAATGCGGTATCTCTCCCCAGATTTTGAGTCCGCAAGTTTTGACCGCAGCTCGGAGAAGACCAAGCCAATGGCATTGCTGAGAATTGCTGCTCAAGATGCAATTCACAAGCTTTCGTCCCAAACCACTGCCGAAATCAACGTGGATTTGGGAGGCGGAAACAAGATATCCAGATCGCTGACACGCGCAGAGCTCGAAGAGGCGAACACTGAGGTTTTTGTGAGGTGTGAGAAGCTGATAACTCAGTGCCTGCTCGATGCCAGATTGACTGCAGAAGACCTGGTCGACGTGATATTAGTTGGCGGGTGTTGTAGCATTCCGAAGATCCGCAGCCTAGTTCTCAATCTGTGCAAGAAGGGAGATTCATACAGAGGAATTGACCTGCTGGAAGCTGCTGTTCGTGGGGCTGCAATGGAGGGGGCTATTGCTTCCTGCATAGGTGACCTGTCAGGCAGCCTGGACCTGTTAACCATTCAGGTGACACCACTGAGCCTTGGTGTCCTTGCTGATGTAGATGGCTTTGCACCTATAATTCAAAGGAACACTGCTGTTCCTGCAAGGAAGGAAATGCTGTTCACCACAGCTCATGACGATCAGACCGAGGCCCTCGTCCTTGTTTATGAAGGAGACAGCAAGAGGGCGGAGGAGAATATCATACTTGGTTATTTCAAGATCACGGGGATCCCTTCGGCCCCAAAGGGCTCTGCCGAGATCTGCATCTGCATGGATATCGACGCTTCAAATATTCTGAGAGTTTATGCGGGTGCGTTCTTGCTTGGCACCCAGCAGGCAGTGTCACCTTTTCTGGAGGTGAGAATGCCCATGACCGTGGATGATGGGCATGGCTGGTGCGAACAAGCTCTGGTTAAGACGCAAGGGCTTGCTGTGGGTTTGGCTACCATTCCGAAGAGAGCGCAGCAGTGAAGTAAGCGCTTCGTTTGCCTTCTGAAATGTTTGCGCTTTCACTCGTCTGTCTGTGAAATGTAAAGATGGATGGACTTTGTTCTTTTTTCGTTTGCAACTCGTTGTGCTTTATTGGAGATTACTATCTCATGCTTTATGTTTGAGGTGATTTATATGATCAAATGCATACTAAAATTTACTTGGATGGCCGTTGCATTTTCTGCCGCATTGAAACTGTCTGTCGACGTTGCGAATAGTGTTGGATTTGTGATCCCTTATCGTTGGTTCAAATTGCAATGATCTCATATTTGCTTTTATTTTCTTGAATAATAAGCCTTGTGGGCTTCGTGTATTCGGGTATTCAAGGAAACGCCAATCTTTAGTTTTGTGG

Network for GWHGAAEX015658

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00012.19	HSP70	116	609	4.00E-89

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09489	HSPA4	Tight junction	map04530
K09489	HSPA4	Antigen processing and presentation	map04612

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	53.370
SRP064423	SRR2545915	Juvenile tuber	89.460
SRP108465	SRR5643513	five period of Gastrodia elata	38.360
	SRR5643514	five period of Gastrodia elata	38.160
	SRR5643515	five period of Gastrodia elata	42.330
	SRR5643524	five period of Gastrodia elata	32.380
	SRR5643525	five period of Gastrodia elata	30.680
	SRR5643528	five period of Gastrodia elata	27.550
	SRR5643658	five period of Gastrodia elata	43.320
	SRR5643659	five period of Gastrodia elata	57.210
	SRR5643660	five period of Gastrodia elata	68.950
	SRR5643661	five period of Gastrodia elata	70.910
	SRR5643662	five period of Gastrodia elata	54.140
	SRR5643663	five period of Gastrodia elata	51.920
	SRR5643664	five period of Gastrodia elata	56.380
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	53.030
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.290
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	48.640
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	44.270
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	47.250
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	57.910
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	45.430
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	59.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	38.690
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	41.510
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	38.210
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	38.210
SRP279888	Gastro	Gastrodia elata tuber	56.08
	Juven	Juvenile tuber	40.18
	Mother_Gastro	Mother tuber of Gastrodia elata	20.41
	Mother_Juven	Mother tuber of Juvenile	18.25