Detail information of GWHGAAEX015670/evm.TU.scaffold_7.85
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|108804931|ref|YP_644868.1| | 1.00E-89 | HAD family hydrolase [Rubrobacter xylanophilus DSM 9941] |
| KOG | KOG1221 | 0 | Acyl-CoA reductase |
| nr | gi|672194193|ref|XP_008776229.1| | 0 | PREDICTED: uncharacterized protein LOC103696395 [Phoenix dactylifera] |
| Swissprot | tr|Q08891|FACR2_ARATH | 0 | Fatty acyl-CoA reductase 2 |
| trEMBL | tr|U6A8C0|U6A8C0_PETHY | 0 | Male sterility protein 2 {ECO:0000313|EMBL:AHA15849.1} |
| TAIR | AT3G11980 | 0 | Jojoba acyl CoA reductase-related male sterility protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 4456198 | 4459021 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015670
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07993.11 | NAD_binding_4 | 115 | 420 | 1.60E-80 |
| PF03015.18 | Sterile | 512 | 585 | 4.30E-17 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13356 | FAR | Synthesis and degradation of ketone bodies | map00072 |
| Peroxisome | map04146 | ||
| Longevity regulating pathway - worm | map04212 |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.370 |
| SRR2545915 | Juvenile tuber | 13.050 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.530 |
| SRR5643514 | five period of Gastrodia elata | 1.240 | |
| SRR5643515 | five period of Gastrodia elata | 1.260 | |
| SRR5643524 | five period of Gastrodia elata | 1.680 | |
| SRR5643525 | five period of Gastrodia elata | 2.730 | |
| SRR5643528 | five period of Gastrodia elata | 6.530 | |
| SRR5643658 | five period of Gastrodia elata | 7.550 | |
| SRR5643659 | five period of Gastrodia elata | 3.420 | |
| SRR5643660 | five period of Gastrodia elata | 5.250 | |
| SRR5643661 | five period of Gastrodia elata | 6.940 | |
| SRR5643662 | five period of Gastrodia elata | 2.680 | |
| SRR5643663 | five period of Gastrodia elata | 3.340 | |
| SRR5643664 | five period of Gastrodia elata | 2.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 1.420 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 1.770 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.730 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.070 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.000 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.460 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 0.450 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.210 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.830 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.830 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 2.49 |
| Juven | Juvenile tuber | 0.94 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 5.87 | |
| Mother_Juven | Mother tuber of Juvenile | 0.72 |