Detail information of GWHGAAEX015678/evm.TU.scaffold_7.100_evm.TU.scaffold_7.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|226315307|ref|YP_002775203.1|4.00E-12hypothetical protein BBR47_57220 [Brevibacillus brevis NBRC 100599]
nrgi|115453227|ref|NP_001050214.1|3.05E-39Os03g0374600 [Oryza sativa Japonica Group]
Swissprottr|O65399|E131_ARATH3.00E-26Glucan endo-1,3-beta-glucosidase 1 (Precursor)
trEMBLtr|I1PBP6|I1PBP6_ORYGL5.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:ORGLA03G0179200.1}
TAIRAT1G118201.00E-25O-Glycosyl hydrolases family 17 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000548493014887402+
Transcript Sequence

Network for GWHGAAEX015678

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07983.12X8401117.90E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K19892GN4 Metabolic pathways map01100
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms40.860
SRR2545915Juvenile tuber41.690
SRP108465SRR5643513five period of Gastrodia elata40.420
SRR5643514five period of Gastrodia elata35.680
SRR5643515five period of Gastrodia elata38.080
SRR5643524five period of Gastrodia elata41.640
SRR5643525five period of Gastrodia elata55.530
SRR5643528five period of Gastrodia elata90.590
SRR5643658five period of Gastrodia elata72.380
SRR5643659five period of Gastrodia elata46.010
SRR5643660five period of Gastrodia elata44.350
SRR5643661five period of Gastrodia elata46.330
SRR5643662five period of Gastrodia elata37.580
SRR5643663five period of Gastrodia elata35.180
SRR5643664five period of Gastrodia elata32.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.810
SRR6049655Rhizomagastrodiae_C368-T10_good_121.720
SRR6049656Rhizomagastrodiae_C368-T07_good_132.100
SRR6049657Rhizomagastrodiae_C368-T07_good_123.730
SRR6049658Rhizomagastrodiae_C368-T04_good_125.480
SRR6049659Rhizomagastrodiae_C368-T04_good_128.630
SRR6049660Rhizomagastrodiae_C368-T01_good_129.730
SRR6049661Rhizomagastrodiae_C368-T04_good_129.820
SRR6049662Rhizomagastrodiae_C368-T01_good_136.740
SRR6049663Rhizomagastrodiae_C368-T01_good_133.170
SRR6049664Rhizomagastrodiae_C368-T10_good_136.990
SRR6049665Rhizomagastrodiae_C368-T10_good_136.990
SRP279888GastroGastrodia elata tuber 24.98
JuvenJuvenile tuber19.66
Mother_GastroMother tuber of Gastrodia elata 58.85
Mother_JuvenMother tuber of Juvenile 30.52