Gene detail

Detail information of GWHGAAEX015689/evm.TU.scaffold_7.121

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189502744\|ref\|YP_001958461.1\|	3.00E-14	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
nr	gi\|720065730\|ref\|XP_010276355.1\|	0	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Nelumbo nucifera]
Swissprot	tr\|P93756\|SD31_ARATH	1.00E-131	G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 (Precursor)
trEMBL	tr\|A0A067FHX6\|A0A067FHX6_CITSI	0	Uncharacterized protein {ECO:0000313\|EMBL:KDO63062.1}
TAIR	AT2G41890	4.00E-131	curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	5267401	5270287	+

Transcript Sequence
>GWHTAAEX015689 CCTATTCTTCCACACTGTCTCTGTCCACTACTACAGTGCCAATGCTCCCACTTCCTAACTTTCTCCTCTAAAACATTTCCCCTTCCTTTCCTGAGCCTAACAGCCCCCACCTGAATCCAACCCTAAAACCTCAAACCCACTCCGTTAAACACTTTGATGAATAGATGGCAATATCAGCCCAAATGTGCGGGGTTTTCGTCAATGGACAGCATCAAGCCGCACCTGAGAATCCAGTCAGAGGTAGATTAAAAAAAAATCATCCTACAGGCACTACATCTACTACTTTGATGGCAATGCTTCTCATTGGATTCACCTGCCGTGGGTTCTCCGCTGACCAGCCTCTGGTTTCCGTTCCTCTCGGCTTCCAGATTTCGGGAGTTGAAAGGGTTATTACTTGGACTTCGCAGAATGGGGTTTTTGCGTTAGGTTTTCTTGGGGATTACGAGACAGATGATTCTGATTTTGTGGTGGGAATTTGGCATAATCTTCCTGACATTGAAGAAAGAATTCCCGTTTGGGTTGTTGGTGGAGGGGTTAGAGTCAGTAAAAATTCCACACTAGAACTATCAACGGAAGGGAGCTTGGTTCTAATTGATTGCAGCCGCCATGGATTGCCAGTTTGGAGTAGCAGCACTGCTTATTTAGGAGTTGAAACTGCTACTCTGATGAATAGTGGGAATTTGGTTCTCATGGATGCTGGAAGTACAGTAATCTGGGAGAGTTTTAATAGTCCTACAGATACCCTACTTCCTGGCCAGCCTCTCTCATTTCCTCAGTCTCTACAAGCCTCTTCAGCAGATTTCATTGCTAGCTACTATAGTTTTGAGATTAATAAGCGATCTGGCGACATTTCTCTTGTTTGGGAGGACAATGTGACTTATTGGAGTAGTCATTTAACCCAGCCTGTGGATGTTCAAGAAGTTCGGCTCGAGGAGGATGGGCTAATGGGACTATTTGATACCGGAGGAGGCCTTGTTTGGTTTTGTTATAGTGAGGATTATAGAGATCCATTTGTGGCTTTTCGACGCTTGAGGATTGATGTTGATGGAAATCTGAGAATATATTCATGGAACAATGTTAGCTTTTCTTGGAAGGTTGGCTGGCAAGCTGTGCCAAGTCAGTGCCATGTCTTTGGATCCTGCGGGTTATATCATGTTTGCAGCTATAATTCTTCTGGACCTTCTTGTGAGTGCTTGTTTCACAATTCTGCTTCCAGTGATTGTGAGAAAATTGCGGATTTGGAAAATTGCAAGATTGGTTTTAGCATGCTTGTTCTCAAGCAGACATTTTTATACAGTCTTTATCCTCCTCATGATATGGATATAATGTTGAGTTTAGATGCTTGCAAAAGTTACTGCTTGAATGATACTAGCTGTTTTGCCGTTACTGCCAAAAATGATGGCTCAGGACTCTGCACTGTTAAACGAACTAGTTTTATCAGTGGTTATCGCTACTCTTCTGTCCCGGCCACTTCATTCTTGAAGGTTTGTCTTGTCCCCGAGGCTGTGTCCGCACAAGCAACTAATTTGCATGGAAACGCATTGCTATTAGATGGAAATCACCGTGTAGATCAAGTTATTGTGCACAAGGGTTTTATGGCTGGTATTGTAGTACTTCTTTTGATCACTGCAGCTGTTTTTCTCACTGTGGAAATGATCATAGTATGGTATGTTCTCTATAGAAGAAGACGGACTAAAATTCAAAAGAGAACCCCATTTGGCAAGGACTTTGGATTGAATCTGCACTACAGTGCCATGGTCCGGCTATCACTTGAAGAGGTTAAAGAGTTGACTAGGAATTTTGGGAATAAGCTTGGTCCGAGCATTTACAGAGGTGTGCTACCTAACAAGTTATTAGTGGCTGTAAAAGTCATTTCTAATGCTGAAGTTTCAGAGAGAGATTTCTTGCTATTGATCTCAACACTAGGAAGCACCCACCACAAAAACCTCATTTCTTTGAAAGGATTTTGCTACGAAACTCCGCACATGGTGCTGGTTTATGAATACATAAGCAATGGTTCTCTTGATCAATGGCTACTCAACAAAAGGCAATGTCCCGGTAAGGATGACTGGCATCAGAGGCTCAACATTTCCATTGGGATTGCACGAGCTCTTTCCTACTTACACCTAGAATGCAAGCAATGCATACCTCATGGCAATTTGAAGCTGGAAAATGTTTTACTTGATGAAAATATGATTGCTAAAGTTACATATTATGGCCTCTATGCCTTAGTACAGAAGGATGTTGCTTCTTCATCTGAAAGTCCTTTGGAGAGGGATATTTTCATGCTTGGTCGAACCTTACTTCAAATATTTGCTGGAAAGAGATATGTGAATGATGATATGCTACGTGACTCGGCTTATGAGATGTGCAAGCTAGGGAAATTGGGTCAGTTTGTTGACCCCCGTTTATCAATCGAGGATTCTGAGCTTCATGGATTGGAAAGAATTGCAAGATTAGCTCTTTGGTGTATGCAGAATAATTCAGCTCTTAGGCCTTCTATTGGCGAAGTGGTGATGGTTTTAGAAGGTGCCCTTTCCTTGGACATGCCTCCAGAAAATGAAGCCTCCCCAATAGGGTTCCATTGACAATTTTTGGGAGCTTAAACACAATTAAGGTAACTTAGTGACCTAGAACTAACTTTTGTTTTCCTAGATCCTCCTTGCTACTAACCTTGCATAATTGATATTTTTGGAACATGAGTTACACTTTCAATTGTTAAATGTATTTTAAATCCAATTTTATGCTGGCTATATATATTTGAGCCATCAACATCTTGCTCTAGTTAGTTGACAGTAATATGTTACTACATAAACTAGATTTTGAAAGTTGTGGGAGTCAACCCCAAATGATGATGATTTTGACGGATTCATCAAGAAGAAAATGC

Network for GWHGAAEX015689

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01453.23	B_lectin	116	205	1.30E-19
PF00954.19	S_locus_glycop	285	344	1.10E-09
PF07714.16	Pkinase_Tyr	560	696	2.50E-20

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_SD-2b

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0048544	Biological Process	recognition of pollen
GO:0006468	Biological Process	protein phosphorylation
GO:0004672	Molecular Function	protein kinase activity
GO:0005524	Molecular Function	ATP binding
GO:0004674	Molecular Function	protein serine/threonine kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	3.580
SRP064423	SRR2545915	Juvenile tuber	6.110
SRP108465	SRR5643513	five period of Gastrodia elata	3.520
	SRR5643514	five period of Gastrodia elata	3.110
	SRR5643515	five period of Gastrodia elata	2.180
	SRR5643524	five period of Gastrodia elata	2.800
	SRR5643525	five period of Gastrodia elata	0.520
	SRR5643528	five period of Gastrodia elata	0.370
	SRR5643658	five period of Gastrodia elata	0.580
	SRR5643659	five period of Gastrodia elata	5.470
	SRR5643660	five period of Gastrodia elata	4.660
	SRR5643661	five period of Gastrodia elata	3.990
	SRR5643662	five period of Gastrodia elata	1.960
	SRR5643663	five period of Gastrodia elata	3.210
	SRR5643664	five period of Gastrodia elata	2.780
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.460
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.180
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.170
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.040
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.630
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.500
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.550
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.900
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.480
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	4.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.150
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.150
SRP279888	Gastro	Gastrodia elata tuber	1.95
	Juven	Juvenile tuber	4.01
	Mother_Gastro	Mother tuber of Gastrodia elata	1.32
	Mother_Juven	Mother tuber of Juvenile	1.72