Detail information of GWHGAAEX015691/evm.TU.scaffold_7.128
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|719970749|ref|XP_010272213.1| | 3.27E-172 | PREDICTED: peroxidase 73-like [Nelumbo nucifera] |
| Swissprot | tr|Q9SZE7|PER51_ARATH | 7.00E-158 | Peroxidase 51 (Precursor) |
| trEMBL | tr|C9WF06|C9WF06_GOSHI | 1.00E-171 | Class III peroxidase {ECO:0000313|EMBL:ACJ11763.1} |
| TAIR | AT4G37530 | 2.00E-157 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 5682304 | 5694936 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015691
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 50 | 301 | 1.40E-66 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 17.600 |
| SRR2545915 | Juvenile tuber | 33.680 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 300.510 |
| SRR5643514 | five period of Gastrodia elata | 293.100 | |
| SRR5643515 | five period of Gastrodia elata | 405.220 | |
| SRR5643524 | five period of Gastrodia elata | 305.540 | |
| SRR5643525 | five period of Gastrodia elata | 120.140 | |
| SRR5643528 | five period of Gastrodia elata | 225.140 | |
| SRR5643658 | five period of Gastrodia elata | 196.090 | |
| SRR5643659 | five period of Gastrodia elata | 226.110 | |
| SRR5643660 | five period of Gastrodia elata | 276.110 | |
| SRR5643661 | five period of Gastrodia elata | 232.760 | |
| SRR5643662 | five period of Gastrodia elata | 273.050 | |
| SRR5643663 | five period of Gastrodia elata | 182.910 | |
| SRR5643664 | five period of Gastrodia elata | 122.030 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 224.730 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 260.140 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 298.730 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 144.920 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 103.710 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 72.560 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 204.100 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 139.600 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 365.330 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 297.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 298.380 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 298.380 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 79.98 |
| Juven | Juvenile tuber | 86.63 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 32.05 | |
| Mother_Juven | Mother tuber of Juvenile | 9.55 |