Detail information of GWHGAAEX015692/evm.TU.scaffold_7.132
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|379728659|ref|YP_005320855.1| | 7.00E-98 | sulfate transporter [Saprospira grandis str. Lewin] |
| KOG | KOG0236 | 0 | Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) |
| nr | gi|672174216|ref|XP_008807263.1| | 0 | PREDICTED: sulfate transporter 3.1-like [Phoenix dactylifera] |
| Swissprot | tr|Q9SV13|SUT31_ARATH | 0 | Sulfate transporter 3.1 |
| trEMBL | tr|W5DXS8|W5DXS8_WHEAT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_4AS_68B3D79A1.1} |
| TAIR | AT3G51895 | 0 | sulfate transporter 3;1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 5815665 | 5822419 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015692
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00916.19 | Sulfate_transp | 74 | 453 | 6.80E-126 |
| PF01740.20 | STAS | 506 | 624 | 3.00E-31 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0008272 | Biological Process | sulfate transport |
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0008271 | Molecular Function | secondary active sulfate transmembrane transporter activity |
| GO:0015116 | Molecular Function | sulfate transmembrane transporter activity |
| GO:0016020 | Cellular Component | membrane |
| GO:0016021 | Cellular Component | integral component of membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.180 |
| SRR2545915 | Juvenile tuber | 20.580 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 88.060 |
| SRR5643514 | five period of Gastrodia elata | 123.520 | |
| SRR5643515 | five period of Gastrodia elata | 74.140 | |
| SRR5643524 | five period of Gastrodia elata | 94.190 | |
| SRR5643525 | five period of Gastrodia elata | 758.750 | |
| SRR5643528 | five period of Gastrodia elata | 1509.220 | |
| SRR5643658 | five period of Gastrodia elata | 614.750 | |
| SRR5643659 | five period of Gastrodia elata | 86.500 | |
| SRR5643660 | five period of Gastrodia elata | 65.600 | |
| SRR5643661 | five period of Gastrodia elata | 55.650 | |
| SRR5643662 | five period of Gastrodia elata | 82.320 | |
| SRR5643663 | five period of Gastrodia elata | 89.580 | |
| SRR5643664 | five period of Gastrodia elata | 93.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 83.450 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 113.040 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 75.530 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 102.510 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 141.010 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 137.530 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 100.960 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 99.920 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 89.050 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 125.200 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 124.460 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 124.460 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 97.88 |
| Juven | Juvenile tuber | 87.30 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 189.52 | |
| Mother_Juven | Mother tuber of Juvenile | 119.10 |