Gene detail

Detail information of GWHGAAEX015697/evm.TU.scaffold_7.139

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743774860\|ref\|XP_010917796.1\|	2.73E-141	PREDICTED: uncharacterized protein LOC105042332 [Elaeis guineensis]
trEMBL	tr\|M0SLY9\|M0SLY9_MUSAM	2.00E-132	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P07720_001}
TAIR	AT3G63290	1.00E-98	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	6478645	6494681	+

Transcript Sequence
>GWHTAAEX015697 GGCAGCGGGAATAACGGCATTCCGCTCTTCTAAATTGTCTTTGAGCCAGCCGGCGGCGGCTAAGCCGTGATGGAAGTCGAAGCAGAGGTGTACGAGCCTTTGGAACTCCATTACACTGATCTTGTCCTTTTATCAACTTCTCAAGATCTATCTTCCTCTCATTCTTCCGAGGAATTGGAGAGGATAGAGCACATATCCGGCGCAGTGATGCGAGCTCTAGGACCGTTGGGTCCTGGTCTTCTCGCAATTACCGGAGTTCCAAAAGCACCAGATCTACGGAGGGCTCTCCTCCCTCTTGCTCGGAGGTTGGCCCTCTTTGGTAAAAAGGAACGGGCGCAAGTCCTCAAGGATAATGACTTAGGCAGTGACGTACCGATGAAGGATCCTGATAGATCTGTCTCTTCATTTGCTATGCAGTTGAAATATGAGCCGTTTTCAAACCCGGACTCAGTATTACCGCTCCTTAACGATGGAAAAGAAGAGAGCCAAGACATGCAGAAAAGGAGTACTGTTAATGATTGGCAGTGCCTTTATGGCAATGAACAAAAGCTGATTCGCTGCTTATTCAATGAACTGGGCATTTGCATGATGGAATTAGGGCTAATGCTAGCACTGGCATGTGATAAGTTGATTGGTGATGGAGAGTTAGGGAAAACCTTATTAGATGCCAGCACTGCAAAAGGGCGCCTCATTCATTATCATTCTGTATTGGATAATTTTATCCAAAGAGAGGAGAACAAGAGAAACAAAGGGTCTATATTAAAGTCAGGAACAACAACTTCGATTTCTACGAATTTTTGCGCTTTCTCTTCATCAGATAATAGAGCTGTTTCCAATTTTATCCACGATGGTGAAAATGAGCAACTCCATAGCAGCAAACTTAGCGTTGGAGTAAGTAGTTGCAGGAAATATTTCTCGAATTTGTGGCAACATTGGCACTATGACTACGGAATTTTCACTGTCCTAACTTCTCCTTTATTCATGTCATCTTCTGTGATGAATAATTCTTTTAGTGTCAAAAATTGTTCATCTCCAGATGAACATACATACTTGCAATTATTTGACTCTAATAACGAGAGGGTTCTTTTGGTGAAAACATCACCTGAGACTTTCATTATTCAGGTAGGGGAATCAGCTGATGTTCTATCAAACGGAAGGCTTAGACCCACACTTCATTCAGTTGGAAGACCAGACATTGAAAGCCTGAGTAGAGAGACCTTTGTTGTGTTCCTGCAACCGCCTTGGAATAAAGTGCTTCCCTTTCCAGGTTATCTCACAGAAGCCAAAGTAAATGATGGGAAGTTTGCTACAAGCAATAATGCACCACTTGGTCATCACATGGTTTACTCTGGAGACTTGCATCATCGAGTTCAAGATATTTTTAAAAGCATACCTTCTTTGTCTTCTCGCTTGAGGCGTGGGATGACATTTGCTGAATTTTCTAGTGAGACTACAAAGCAATATTACGGCGGTCGCGGTACTCAGTATCGAAGGCAATAATCTTGAGCGTTTTTGAGCTTCTATAGGGTGGTTTTTATAAATGAAAAATCAGTCAAAAGTGCGTGAATATCTTAAGCAATCATCATTTAGTTTCACGTGATTGCTGTTTAAAAGGTCATTATGATGCAAACAGACATACAGGTAAGGTAAATGGATTAAATGTTATAAACGAAATTAATAATAGGGATGCAGGGTATAATGTTGATTTCATTGGTAGATTGTAGATCAACGTATCAATTCTTGATTTATCTTCGGGTGAGACGCAGCAATCACGTTTTTTCATGCTATTATTAAGGTTACGCCTGTGAAGGAATCTGTCAGTAATTATTCCCATAGATCTGCAACATTAAAAAGAATAAAGCATTCAGTTAAGGCATTTCTTCCGAAAAGACACCTTGTGTACATTAAACATGTTTCATACTAATAAATAATTATATATATTTTTATTTTTCTCCCACATTGTTCCCAAAGAGGCTTGATGGTTTGCATGTTCTGAGTGTAAGAAGTGAATTGAATTGGTGCAATACAGCCTTGTAGTTTCCCCTTTACTTTTTGTTTAAACTTTTTTATTTTTATTTTTCCAACACATCAAGTCTTTTTTTGAGGCTCTTTCAAGGCGTCAAAATGCATATCATAACTTTATTCTTACCTCATACCCCACTAGAGATCTGCAGTAGTTTGCATTTGTCAGCACAGTACTTGATGAACCACATTCACTGTTCTTGAGGGATACGTTAGACTTGTCAAGCTTGATTGACCATGGATATTGATAACTATTGACCGCCAAACCAACATGAGAAGATGATCTTTGCATTCTAATACTTCTTGGAATATTTTTCCCTTCAACTGATTGCCTCCTCTTGCTTGATTGTCTCTCATATGTATCAAGCCGCGGCCTTGGCGCACTCTGTGACCGTGCCTTGGCCCTAGAGGATTCTGTATTGGACATATAATTAGGATTCAGGGGACACTCAATAGAAGCATGTGTGGGGATGGAAATGGCAGACAGGTGTGGGCTACTTTGTGCAGTGCCAAAGGAGAACTCCTCGAAGTGCCCGCTGTATCCTCTAGGGCTTATGGGATTCATTTCACTTACTGCTGATGAAACAGGTGAGAATTGTGGTGGGTGATCAGCCTTGCGACATGGGATGGTAGAATATCTCTGATTATTACCCTCTATTTGTGCTATAGAATAACTGTTTCTGTCCTTTGAATGCCTTCTCAGTTCCCCAAGATCCATCTCTACAATTTTGACATATTCTTCATCATTCCTATTAATTTCCTGCAACAGTGCATATTATTGTTTTTTTTGGGTTTCCTAGTTTTTTATTTTTAATTTGAGTATTACAATGCAATAAATATAGTAGAAATGTGCTTACAAATGATTGTCTAAAACGTGGATGCTGTGGGGATCTTCTGTGATTCTGCTGCGGCAGCCTTTGTGATATGGCTTGAGGCTCTTCAAATCTCTCTGTTCTTTTTGCACGAGCTCTAACTTGGGCGTTAACCAGTGCTTGCATGCATCTGAGTGTTGCAGAAGCCTGTTTCCTCACCAAATGCCCTCTTACCAATGCTTGCAACTTTACTAATCCTTTCAGCGCACATAAAGCTTTCCTTGCCTGCAGGAGACTATGTTATGGTTATAATGATATATTTTGCCGGTCTCATCTGCATGATATGCAAGGTAATTTTATCCCAGTGTTTATATTATACCGCACATTAAAATGCACTAGAACATTCTGACCAAATTATTGGTTAAATTTTCCATTCAAAACTCAGCAAATGTCAATATTTTGCATTGAAATTTGTATAACATCAAATATTAAATACTTAGCATGACCTGGATATTCTTTTTTCCCCACTTCAAATCTGCAAATCGACTATCCTAATAGTTTCAAGCTGTAAGCTCAAAAGCAATATATTTTCGTTTCACAATCTCTTCTCCAAACATTATGTTATTTCCTGCTCCAATTTTCTCATTTCCTCAATCTATAAAATGTCCTACTTATTTTGCCTAGTTGATTAAAGGAACCAAATGCTGGAAGCGTGAACTTCAAAAGCATTATGTCATGCTCTCTCATCTCGGGTTGGTTTCAATTCTTGTTTGGCTATTGGAGCAAGTCAAACTAGGCATGAACTTGACATCGACATTTTTGAGTTCGGCTAGACTCAAACTCGAATCCGGCTGGACTCAATTTGATTTTGAGCGAATGCAAAAATTGAAATTTAATAATTTTAAAGCTATGATGGAGACCTTGATCCAATTCCGGCAAGTTGAGTCGACTAGAGTTGATATGCTAGTGAATTAACCTTATCTCGCTATAAACACTATTTAACTCGAAACTAATAATTAATTTTATTGACTCAATTTCAAGTTAATTAAAACTTGAGCAAGTTTTAGCATCCGCAAAAGGAAAGATTATCATGAAATTTATTACTGGGACAAGAGAAAGGTGAATTACCAGATAAGATCTAAAGGCAGACTGAATTCTGATAGCAGCAGCCTCTTCGATGGCCCTCGTCGTTTTTCTATTCGCGACAGCGGTGAGTTGTACTACAGCTGCTGCGGCTTGTGCTGCAGCCACTGCGGCATCTGCGGCTACTGCAGTGGCCACAGCCACTGCCATAGCATGCCTCTTTTGGTTGATTTCTGATTCAAATAAACCCCTACAAAGGGCGCTTGAGCTCATTTCTAAAGAACTCAATTCCCTTGAAGCTCCCATAGATCGCCGGAAGCTCCACCTCCTCTTTTCCCTTGGTGCCGGAGCTGTTCTGTTTTCTGCAGCCATTGAAATATTGTTGGAATCCTGAGTCTTCTTCTCCTTCTTGCCCATCAATAACAGGCTGCGGAGCCATTTGCTTGCCTTTCCCATTGCTCCTCCGAGCCTATCTGCAGTCTGTGGCATTTCTGCGTTGGATGACCTATCAAACCCTGTTGTTCAGAGGCTCGATTCGCTGAGGAAGGAAGACCATGGAACAGCTATAGGAACCAATAAGAAAGTTAACTCGTGAAGATTGGAGGTATGACGTGGCTTCATATGCGTTGGCAATACATTCCATGGTGCTGTAAAAACGAGTTGTGGTCCTTATTATACTTGCTGAGGACCATTTTATACTGCCGATCTCCAGTCTCCTGGTGATTTTGTTATCCGTTTGAAGAAATAGTGCTGAATTGGGAGATGAAAAGCTGTTGCAAAGGATCAGTTGGTATTCCTACTGCTTCTGCAATAATTACTGAGTCTCTTTCTTTTATACCAAAATCATTTTTTTTCTCTTTGAAGCTACTCAAGATCATTGTGATCCTTATGCCACCTTTTTTTTACATCTAGCATTTGTGATTACAATTTCAATTTAATTCTATTATTTGGTATACTCAAGATCATTGAAGCTACTCAAGATCATTGTACTCAGGGTCGATGCCCTATTCTCTCTTCATTAATTTCATTATTCGGTATTATTGTATAGTTTTATTGGTGTAAATAATTGAGATGCGCATTTTGGTGTTTGGGAGGAGAGGAAAACAGTTGGCACATCACGTGGATTTCTTATATAGTGCAGTACCTCGTTAGGGCCATGTGCTTGGAAGGGAGGGCGCAGCCAACTAATGGCTTTTATTCGCTGTAAGTGCCCCTCTTTATTTTTTATTTTTATATAATTCTCTTCTTGCTGCACTCACTCTATTTGCTGTTTCAGCCCAGCTTAGTTGTTGGTCCTTTGCCTACAGTCCCAACCCTGTGTTCCATCTTAACACCTATAGAAGACAGTATTTCAATGTATATGTTATTATTGTGCATAGTTACTGTATCATCTTAGGATTCTTATTAACTAATAATTATCAAAAAATTTGCATGATTTTAATTTTTTCATTAA

Network for GWHGAAEX015697

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.030
SRP064423	SRR2545915	Juvenile tuber	10.850
SRP108465	SRR5643513	five period of Gastrodia elata	4.790
	SRR5643514	five period of Gastrodia elata	5.230
	SRR5643515	five period of Gastrodia elata	4.840
	SRR5643524	five period of Gastrodia elata	5.800
	SRR5643525	five period of Gastrodia elata	3.730
	SRR5643528	five period of Gastrodia elata	2.630
	SRR5643658	five period of Gastrodia elata	3.890
	SRR5643659	five period of Gastrodia elata	4.910
	SRR5643660	five period of Gastrodia elata	4.570
	SRR5643661	five period of Gastrodia elata	4.290
	SRR5643662	five period of Gastrodia elata	4.630
	SRR5643663	five period of Gastrodia elata	4.560
	SRR5643664	five period of Gastrodia elata	3.390
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.840
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.200
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.110
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.730
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	8.380
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	9.240
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	8.490
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	6.300
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.110
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.110
SRP279888	Gastro	Gastrodia elata tuber	5.32
	Juven	Juvenile tuber	8.25
	Mother_Gastro	Mother tuber of Gastrodia elata	5.44
	Mother_Juven	Mother tuber of Juvenile	8.58