Gene detail

Detail information of GWHGAAEX015700/evm.TU.scaffold_7.143

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743878267\|ref\|XP_010908133.1\|	0	PREDICTED: uncharacterized protein LOC105034615 [Elaeis guineensis]
Swissprot	tr\|Q9C810\|Y1342_ARATH	5.00E-09	PHD finger protein At1g33420
trEMBL	tr\|M0SZR3\|M0SZR3_MUSAM	3.00E-86	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P18840_001}
trEMBL	tr\|M0SZR3\|M0SZR3_MUSAM	1.00E-53	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P18840_001}
TAIR	AT1G32800	2.00E-78	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	6598688	6646864	-

Transcript Sequence
>GWHTAAEX015700 CGCGGACGTCAGTGAGATTCAAAATTTTATGCATTTTTACTTTTCAATTCCGTTCTCCTGGTAAAACTATTAACCGTCGGCCCGCCCACGATCGAATTTCCACCCCCTCTCCCCAGATGAGCCAGTGGCAGAGAAGTAAAAGGAGCACTGGACGACTCTCACACACCAGCCATGGCTAAAAAATCCAAAGCATTCGTCCAGTGAGCTTCGTCCCCTGATACATCCGTCCTCTTCCCTCTATAAAGGATTTAGGGTTGAGGTCCATCCCAATGGTTTTTGTCGAACGTTTCGGCAGAATTCTGTTAGTATTCTAGCGACCTCAATGAAGGGGCGCTCCAACCGCCTTCCTCCTTCCGCTCCCCTCGAGGACTGGGGCGATGGACAATGGACGGTGGACTGTTCCTGCGGCGTCAACTTCGACGATGGCGAGGAGATGGTGAGCTGCGATGAGTGCGGGGTATGGGTGCATACCCGTTGCTCTCACTACGTCCGTGGGGAGGCTTCTTTCGCCTGCCATAAGTGCACTCCTACATCCAAGGGCACCCGTGCGGTTGTCACCTCCGCTGCCAATAACTTTACCCATGACGCGGAGGAGACAGAGGTCGCGAAGCTTCTGATTGAGTTGCCTACGAAGACCGATCGTCCGCCTCCGATCCCGCCTGGAGGTGCTCCGTACCGCCCTCCTTTCAGGCTGTGGGCTCAAGTCCCTAAGGAGGAGAGGGTCCATATGCAGGGCGTTCCTGGAGGCGATCCTTCTTTGTTTCGGGGGTTATCCTCAAAGATCGCCTCGCCGGACCTGTGGAAGTGCACTGGATATGTTCCGAAGAAATTCAATTTCAAGTACAAGGAGTTTCCTTGCTGGGAGGAGGAAGAGAGAGATAAGGCTAGTCTTGGTGCTGATGCGCTTTTCTCGCTGTCCAAGGAAACAGTACAAGCTGTTCCAGTGAAGTCCTCTGAAAAGATTTTATCCCCGGGCGGAACTAGAAGGAAAGATGGGCAGAATCTTCCGTTGGGCTCTCGTTCTTTTGGTTGTGTCAAGAAGGAGAGAAACAAACTTAGAGTGGCTGGGTCGAGCAAGTGCAGGAAAGGAGAAGCAGATGAGAAGGATTTCAGCGGCAGAAAGAAATCGCAAGGAGATTCTGACAGGCTTTTGGCGAATTCCAAAAATAAAGATGAAACTGTTGCTGTGTTTGACTCTAGAAAAGAAGATTTAAGCGAGGATGGGAGACTCCATATTGCTGAGTCTGATGTTCCTGATACCAATAGTACGCACAAAAGGGAGAACATACCTCTTCCCAAGCCTAGCTGCAAGAATCTTGATGAAAGGTTGAACAATGGAAGTAAATCCAAACACATGGTAGTCTTCAAGACTTCTAAGAAGCATTTGTCTGACGAGGTGCCAAGATCAAAACTTTCCCTAGAAACACTTGTAAAAGCTGAGAAGGCCAATAGGCTGGATGGAAGGGTTTCTTGCAAATTAAATACAACTGTTACAAGTCATGTTGATGATAGGAATACTGCTAAAAGTTTTATCAAGCAGGAGGATGCTGTTAAACCGGCTTTGAGCTTCAAGGAGCCGAAGGATGAAAATCACTCTCATGCTGTGCCCACTGAAGTTATAACGGGTACAATAATGAACTCAAACTTTTTCAACCATGGTAGTCAACCAGATGTGACAGATGTAACCCTTGTTCCATCCTCTTCTGCTTCATGTTCTGTTAGTGCCAAGAAGGCTGAGATCAATTTGAAAATTGAAACTCTTAATGATCAAGCTATAGAAAATTTAAATTTCCCTCGCCATAATTCTGCTGGAAAACAGTACGTGAAGGATGATTTGCCTCAAAGTCTGATAAAAGCAAATGCTTACTCATCAATTACTCTTGATGAATCTAAAATGAAGACGAGTATACAATATGAGGAACAGAAACCCGAGGCTTTGCTGAAAGATTCAGATCTAAGCCAAAGCTTTCAAGAATGCATAAAATCAAACCGTGCAGACCCCAGCCATTCATCTTCTCATCCCGAAAAGGTTGCTGCCACTGGGAAAGAGTTTTTGAAACCAACACCTCTTGTAGGCTCCAATTCATCTATTTGCAGTAACCAGAATTCTGCAGCTAAGGCAGCGTCTGGGAAGAATTTTCATGTGGTCAAGCAGCATAGTGTAAAGGTGACAAATTCTTTCAAGCCTGCTGAGGACAAAAAAGAGCAGGAGGTTTCTCCTACTGGTTCAGAATTTAGTGGATCAAAATCATTACAAGCAGGAAAAACTTCTCAATTACTTGCTAAGAATCATTCTTTAGATTTGAAGGGACAGCCATCCGGTCCATCTTTTCAAGCTTCAGCTGGGAACCCTGCAACATCTTCAGGAATAGCTGTGGCAACTGCATCGCCAGTTCAAAGTCCATCCAATCAGCTTAAGGCTGCAGCTTCAGGTTCATTCCAAAAAATTGACAAGACAACTCAGCCTAATAGTCAACCGGCATCAAAATTTCTTGGCCACTCGTTGGTTATGCAAGCATCAACTTTAACAAATTCTGCTGCTACGCTGAGTGACGAGGAGCTGGCTCTATTACTGCACCAAGAATTAAATAGTTCGCCTAGAGTTCCTAGAGTTCCTCGGATGAGACAAGTAGCAAGCTCACCGTTTTCAACTCCAAGCTCTACAAGTATGCTATCAAAACGTTCGTGTTCTGGGGGAAGAGATCAAGTTTCGTTCTTTAGAAGAAAGCACAAAGATGCATCCAAAGATGGCTCTCGTCATTCACGAGACCGTGGTGCAGGTACTGCTGAAAGCAGAAGGATGAGTAGGCATTCCCCTGAGCCCAATCAAGATGAATCAGCCATATTTAGCGGTGGTTTTGCTAAAAGGCGTAAAGGGAGTAAACCTCCTAATACCGTACCATCTTTAAGAACCAATGCTTCAGGTGCTCCTATTGAAGATGCGACCAGCTTGACTCCGTTGACCAAAGAAGAGAACAATGCAAGGGCCTCACCAGCCAATGTTGATGCGGATGCATCCCTTGTAGGCCGTAGTTTGCCATGTTTGATTGATGAGATCGTGTGCAAGGGGAAGTGTTCAACGTATGAGGAACTTTGTGATGCCGTCCGACCATACTGGCATAGCCTGAGGAAGCCAAATGGGGAGCGCTATGCATATTCTAGCCACTCCCAAGCTGTTCTCGACTGCTTGAGGAATAGGACTGAATGGGCTCATCTTATTGATCGTGGTCCAAAGACCACCACGAGCAAGAGGAGAAGGAAGCAAGATTCTGAAACCCCTGCCATGGAGTTGGAGCATGAGATTAGCGGCAATCCTCTCAAAGAGGATGTTCCAAAAGGAAAGCGAAATGTACGGAAGCGCAGATTAGTGGGTTTGAAGGAGGCGGCAAATAAATGCTATCAGGGCACGTTATCAGATGAAAACGATGAAAACGACAACGATGATGATGATGATGGTGATGATGATGATGATCTTTCTGCTCAATATCGATTGAGTAATGAGGAAACCGGATGCCATTTAAGTGATGGTAGTGGAGCCGAGGAACCCAGCTCCAGCTCTGGTGATTCTGATTGAGACTTGGTGCTGGCAGCTTCTACTTTTACTGTAGCTTTAATTTTTTTAATTTTTTAATAGAGTTTTGAGTCAACATATTGATGTGTAGAGCCAGCATGTCCTGCAGGTTAAAAACCATATATTTGTCTTAGATTAGCGCTAGAATAGTGATGTTTCTTGTAGGGCTGCTCATTGAGAGTACCCAATTTATAGTGAACTAGTGCCCAATCCTGTCGAATGTATATTTGTAATATTGTATGTAAAATGTGATTGGTCATTTTCTAATATGGTCTTGCTTTGGGAGTCCAAGCCTGGCTATTTAATAGAATGCTGCTATACTCTGCTTTAGAAGCTTTCAAAAGCAAGTCAATTTTTTGATGAGGAGAAAATCCAAGTGCGATAGAGGTTTGTACCAGTGTTTTTGTTTGTG

Network for GWHGAAEX015700

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX015700
MKGRSNRLPPSAPLEDWGDGQWTVDCSCGVNFDDGEEMVSCDECGVWVHTRCSHYVRGEASFACHKCTPTSKGTRAVVTSAANNFTHDAEETEVAKLLIELPTKTDRPPPIPPGGAPYRPPFRLWAQVPKEERVHMQGVPGGDPSLFRGLSSKIASPDLWKCTGYVPKKFNFKYKEFPCWEEEERDKASLGADALFSLSKETVQAVPVKSSEKILSPGGTRRKDGQNLPLGSRSFGCVKKERNKLRVAGSSKCRKGEADEKDFSGRKKSQGDSDRLLANSKNKDETVAVFDSRKEDLSEDGRLHIAESDVPDTNSTHKRENIPLPKPSCKNLDERLNNGSKSKHMVVFKTSKKHLSDEVPRSKLSLETLVKAEKANRLDGRVSCKLNTTVTSHVDDRNTAKSFIKQEDAVKPALSFKEPKDENHSHAVPTEVITGTIMNSNFFNHGSQPDVTDVTLVPSSSASCSVSAKKAEINLKIETLNDQAIENLNFPRHNSAGKQYVKDDLPQSLIKANAYSSITLDESKMKTSIQYEEQKPEALLKDSDLSQSFQECIKSNRADPSHSSSHPEKVAATGKEFLKPTPLVGSNSSICSNQNSAAKAASGKNFHVVKQHSVKVTNSFKPAEDKKEQEVSPTGSEFSGSKSLQAGKTSQLLAKNHSLDLKGQPSGPSFQASAGNPATSSGIAVATASPVQSPSNQLKAAASGSFQKIDKTTQPNSQPASKFLGHSLVMQASTLTNSAATLSDEELALLLHQELNSSPRVPRVPRMRQVASSPFSTPSSTSMLSKRSCSGGRDQVSFFRRKHKDASKDGSRHSRDRGAGTAESRRMSRHSPEPNQDESAIFSGGFAKRRKGSKPPNTVPSLRTNASGAPIEDATSLTPLTKEENNARASPANVDADASLVGRSLPCLIDEIVCKGKCSTYEELCDAVRPYWHSLRKPNGERYAYSSHSQAVLDCLRNRTEWAHLIDRGPKTTTSKRRRKQDSETPAMELEHEISGNPLKEDVPKGKRNVRKRRLVGLKEAANKCYQGTLSDENDENDNDDDDDGDDDDDLSAQYRLSNEETGCHLSDGSGAEEPSSSSGDSD

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	34.130
SRP064423	SRR2545915	Juvenile tuber	28.010
SRP108465	SRR5643513	five period of Gastrodia elata	20.890
	SRR5643514	five period of Gastrodia elata	19.020
	SRR5643515	five period of Gastrodia elata	21.810
	SRR5643524	five period of Gastrodia elata	21.180
	SRR5643525	five period of Gastrodia elata	22.440
	SRR5643528	five period of Gastrodia elata	23.140
	SRR5643658	five period of Gastrodia elata	22.450
	SRR5643659	five period of Gastrodia elata	22.820
	SRR5643660	five period of Gastrodia elata	24.460
	SRR5643661	five period of Gastrodia elata	24.020
	SRR5643662	five period of Gastrodia elata	24.700
	SRR5643663	five period of Gastrodia elata	25.600
	SRR5643664	five period of Gastrodia elata	26.320
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	18.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.050
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	15.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	21.510
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	21.520
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	24.610
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	20.560
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	21.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	14.900
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.880
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	18.030
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	18.030
SRP279888	Gastro	Gastrodia elata tuber	28.28
	Juven	Juvenile tuber	43.46
	Mother_Gastro	Mother tuber of Gastrodia elata	30.79
	Mother_Juven	Mother tuber of Juvenile	49.19