Gene detail

Detail information of GWHGAAEX015704/evm.TU.scaffold_7.149

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|672182362\|ref\|XP_008811426.1\|	PREDICTED: LOW QUALITY PROTEIN: filament-like plant protein 4 [Phoenix dactylifera]
Swissprot	tr\|Q0WSY2\|FPP4_ARATH	Filament-like plant protein 4
trEMBL	tr\|M0RWF7\|M0RWF7_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P02490_001}
TAIR	AT1G19835	Plant protein of unknown function (DUF869)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	6737838	6756390	+

Transcript Sequence
>GWHTAAEX015704 CTTTCCGGAAAAGAGGTGTCAATCAGGAGGGTAACCCCAAACTTAAATATAAATGCCAAATTTATTTTCGTGTCGCACCGAACGCGAATCTTGCTGTAGCTGGCCTCTCTGGCTTTGGTGTCGGTGTCCATTCCGTTTGTTCCCACACCTTGCTCCGAGCAAGCTCTGAGCTTCAAGCTGGATGAGAGTTTTTACCTGAGGACGGAAGAGAGGAAGAGAGCGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTAAGGAAGGATCGAAAAGGAATAACGAAAGAATTGGTTATTGGTTTTTCCATCAGTCAGTCTCATTCGGGAAAAAACAAATCTGGCCTCGTATTTTGAGAATCGATAGCTGCATTACTCTGGATATCAGTCGGCGGATTCGTGGATCGCTAATCTTCTACTTCGTGTCCGTTTTTTGGAATTTAATGACGTCGTCTCCAACTTCTATGGTTTGACGATTCAAAATCGTGGTGATGGATCGGCGTAGCTGGCCTTGGAAAAAGAAGACATCTGATAAGGCATCCTTTTCTAATTCAAATGTTCATCAAACAGAAAAGGATGATATAAAGAATGAAAAGCTTATACAAGTTACTATGGAGTCATATACGTATCTTACTGGATTGGAAGATCAAGTGAAAACCCTAAATGAAAAAATGATATCAACCCAGTCAGAGATGTCATCAAAGGATGATCTAGTAAAGCAGCATGCTAAAGTTGCAGAAGAAGCAGTTTCAGGATGGGAAAAAGCTGAGGATGAAGCTTTAGCTCTGAAAGAGCAGCTTGAATCTGTCACATTACTGAAAATTACTGCTGAAGAAAGAGCACTTCATCTTGATGGTGCTCTAAAGGAGTGCATGAAACAAATACGAAATGTGAAGGAAGAGAGTGAACAAAAGTTGCATGATGTGGTTTTTTCAAAGACAAAACAGTGGGAAAAGATCAAGGCCGAACTTGATGCTAGAATCACTGTTTTTGAGCAAGAGCTACAAAATGCATTAGCAGAAAATTCAGCACTTTCAAGATCGCTTCAAGAACGATCTAATCGGTTGATGCAGGTTAGTGAAGAAAAATCTCAGGCTGAGGCTCAGATTGAAGCACTGAAGAATGATTTACTTGCATGTGAAAGAGAACTAAGTTCTATGAAGTACGAACTTCATTTGATTTCTAAAGAGCTTGAGATTCGCAATGAAGAAAAGCACATGAGTATGAGATCTGCAGAAGTAGCAACCAAGCAACACTTAGAGGATATCAAAAAGATTACTAAACTAGAAGCTGAATGTCAAAGGTTACGTGGTCTTGTTAGGAAAAAGCTACCAGGGCCGGCTGCATTAGCTCAGATGAAACTAGAAGTTGAAAGTTTGGGCAAAGAATATGGAGAAAACAGGCTGCGAAGGTCTCCTGCAAAGAATTCTAGTCCTTACCACATATCTTCATCTGAGTTTGCATTGGAAAATGCTCAGCAGGTTCACAAAGATAATGAGTTCCTAGCTGCAAGATTGTTGGCCATGGAGGAAGAAATGAAGATGCTCAAGGAAGCATTATCGAAGCGCAACAGTGAGTTACAGTCATCAAGAAATATGTGCGCTAAACAAGCAAACAAGCTCCACAATGTCGAATCATATATGCTTTTTCTAAATCAGCAGAATGGGCATTCCAAACCACATTTTGATTTCCATTTTGAAAATGAAAGCAACCCACCAAGTTTAACCTCCGTATCTGAAGATGGTGTTAATGAAGATGGAAGCTATTCAGGGTCTTTGTCTACACCGCTGATTTCTGAGCTCTTACACTTGAAGAAAGAGACAAATATTGACCGAATTTACATGGGTGAGAACTCAATTCATTTGGAACTTATGGATGACTTCTTGGAGATGGAGAGATTAGCATGCTTATCTACAAAGAGCAATGGTGATGCCAACTTAGCAAATGATTCGAAACCTGAAAACACGGAGTCCAATTTTTTGATTGAGCATGACTACAAACAAAAAAATGCTGATGCTGAATTATCTATGAAATTGCCTACAGAACATGCGTCAAATGAAAACAAGCTTCCTCTCTTGAAACTTAAATCAAGAATAACTTGCATTTTTGATTCTCAAGCACATGACATTAATATGAAAATCATTATCGATGATATTATGCATGCTGTTCAGGATGCTCAGGAAGAGATACTCAAAGAACAAAATGAATCCACAGATGACTTGGCTGAGCAAAAGTATAGTCAAGACTGTATTCAGAAAATTACTGCTGATGGAATATCTTTGGACCAATGTGCTGTTTCATGCACTAAAATTTATTGCGTTCTTGACCAACAACTGAAGGATTCCATTTCTCTTATTAACAATTTTTTTCTATTACTGGGGAAAGATGCTGCTGAAAATCAAAATAGCTCTAATGATTTTGTAGGAATAAGCAAGAAAACTGATGAACTTTCTGCATCTGTAGATAAGATAATACATACAGAGCTAGGCCTGTATGATTTCATTCTGGTCCTATCCGATATACTATGTGAAGCAACTGATCTTAGGTATAAAATGTGGACAGCGAAGGGAAATGAAGGTGAGCATAATAGTCCAGATTGCATCGACAAAGAAACTTTATTAGAAAATAATGTTACTCAGCATGATCCAAGTAAAGAAAGTTTGTCAGGATCGTCTTCTTTGGTTCCCCGTCCTTCCTTCTGTACAGAATTTGAAGGGTCCAATGGTTTTGGATATGAAATAAAGACCACAGTACCTACACTATCTCCAGTAGATTTTGAGAAGTTGAAAATGGAGAAAGAAAACTTGGAGATGGATTATGTTAATTGTAAAGAAATGTTAAATCAAACAAGTTTTAATTTGGTAGAAACTGAGAAACAGCTGTCTGAGCTTAAATTAGAGCTTGCTTCTTGCCAAAAGTCAAACAGCCTGGCTGAGACTCAGTTGAAGTGTATGGTTGAATCTTATAAGATGCTGGAATCCCAAAAGGAGGAACTAGAATCTGAATTAGGCCGTCTGCATGCCAAAGCTGAAACTTTGTATAATGAGCTACAACAAGAAAGACAAAGTCACAAAGAAGACATTGATAAATGGAAAGTACTTAAAGAGCAGATTGAAGGGAGTATGAAGTACCCAACTCTCTTATCACCTTCAAATGCTGATTCTTTGAAGAACCAACAAGAAATAGATATAGCTGCAGCTGCAGAGAAGCTGGCTGAATGCCAGGAGACTATTTATCTACTTAGCAAGCAGCTGCAATCAATGCGCAATTCGGCGGAACCGACGGACACTTCTCCAATCCACAGACCGCTGCTCGGCGACGTTCTGAAAGATGCAGCTAATTTAAATAACACTCAAGTCATCTCCACCCCGCGGCTTTCAGGCGAGCAGGTGTTGCAAACTGGCGGTGAATCTCCATTAAATGCTTTTAACTCTCAGCCGAGCCCATCAGATTTGCTGGAGTCGAGCCTCCTCGTCAAGTCTCCCATTAGCTCAAAGCACCAAAGCAATAAGAGCTACCGGTCATCTTCATCATCATCTTCTTCAGGCGAGAAGCACGGACGGGGAATCAGCAGATTCTTCTCCCGTGGGAAGCACGAAAATTAACACCCTACACTCAGGAGAGCATCATTTCTTATGCAAAAGACTCATAAGGTGATGCTTTTGTTCATCTTTTGGATTGATTTTGAGATTTTAGTATTGATTGCATCAATCCAATGGAGGGAAGGAAATTCCGTTCCGATGTGTGAATTTTTAGAGGTTCGTCTTTTTGCACAAGTTCATGAGTCCGGGGAAAGTGGAGCATTGCGCTTCTTACAGGAATCTTGACGAATAAAAATGCTTTTGGGTGATTTTTGCATGTAAGGAATAATGATATATAGTTTTGCTTGTTTTGTAAATTGATATTTGTTTATTTGATTGGTCTTATATTTTTTTTGTTGGCTTACGTGCCATTTATATTCTAATAATTTGGAGCACTTTGTCTGGTTAGATTTTGGGACAAGCAAGTCTTTTACTTGTACTTGATTGCATATGGGAGGCTATGTTTTGTCATCC

Network for GWHGAAEX015704

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05911.10	FPP	71	927	9.10E-281

Protein Sequence

>GWHPAAEX015704
MDRRSWPWKKKTSDKASFSNSNVHQTEKDDIKNEKLIQVTMESYTYLTGLEDQVKTLNEKMISTQSEMSSKDDLVKQHAKVAEEAVSGWEKAEDEALALKEQLESVTLLKITAEERALHLDGALKECMKQIRNVKEESEQKLHDVVFSKTKQWEKIKAELDARITVFEQELQNALAENSALSRSLQERSNRLMQVSEEKSQAEAQIEALKNDLLACERELSSMKYELHLISKELEIRNEEKHMSMRSAEVATKQHLEDIKKITKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGKEYGENRLRRSPAKNSSPYHISSSEFALENAQQVHKDNEFLAARLLAMEEEMKMLKEALSKRNSELQSSRNMCAKQANKLHNVESYMLFLNQQNGHSKPHFDFHFENESNPPSLTSVSEDGVNEDGSYSGSLSTPLISELLHLKKETNIDRIYMGENSIHLELMDDFLEMERLACLSTKSNGDANLANDSKPENTESNFLIEHDYKQKNADAELSMKLPTEHASNENKLPLLKLKSRITCIFDSQAHDINMKIIIDDIMHAVQDAQEEILKEQNESTDDLAEQKYSQDCIQKITADGISLDQCAVSCTKIYCVLDQQLKDSISLINNFFLLLGKDAAENQNSSNDFVGISKKTDELSASVDKIIHTELGLYDFILVLSDILCEATDLRYKMWTAKGNEGEHNSPDCIDKETLLENNVTQHDPSKESLSGSSSLVPRPSFCTEFEGSNGFGYEIKTTVPTLSPVDFEKLKMEKENLEMDYVNCKEMLNQTSFNLVETEKQLSELKLELASCQKSNSLAETQLKCMVESYKMLESQKEELESELGRLHAKAETLYNELQQERQSHKEDIDKWKVLKEQIEGSMKYPTLLSPSNADSLKNQQEIDIAAAAEKLAECQETIYLLSKQLQSMRNSAEPTDTSPIHRPLLGDVLKDAANLNNTQVISTPRLSGEQVLQTGGESPLNAFNSQPSPSDLLESSLLVKSPISSKHQSNKSYRSSSSSSSSGEKHGRGISRFFSRGKHEN

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	20.720
SRP064423	SRR2545915	Juvenile tuber	35.010
SRP108465	SRR5643513	five period of Gastrodia elata	23.530
	SRR5643514	five period of Gastrodia elata	17.050
	SRR5643515	five period of Gastrodia elata	26.050
	SRR5643524	five period of Gastrodia elata	15.680
	SRR5643525	five period of Gastrodia elata	18.450
	SRR5643528	five period of Gastrodia elata	16.450
	SRR5643658	five period of Gastrodia elata	21.740
	SRR5643659	five period of Gastrodia elata	41.660
	SRR5643660	five period of Gastrodia elata	29.590
	SRR5643661	five period of Gastrodia elata	38.310
	SRR5643662	five period of Gastrodia elata	34.870
	SRR5643663	five period of Gastrodia elata	44.810
	SRR5643664	five period of Gastrodia elata	27.020
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	16.560
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	14.820
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	16.730
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	16.690
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	15.710
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	16.880
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.930
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	18.370
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.040
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	16.240
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	15.920
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	15.920
SRP279888	Gastro	Gastrodia elata tuber	30.14
	Juven	Juvenile tuber	27.00
	Mother_Gastro	Mother tuber of Gastrodia elata	4.41
	Mother_Juven	Mother tuber of Juvenile	15.58