Detail information of GWHGAAEX015718/evm.TU.scaffold_7.167


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108756884|ref|YP_628536.1|1.00E-48M20 family peptidase [Myxococcus xanthus DK 1622]
KOGKOG22762.00E-166Metalloexopeptidases
nrgi|743827065|ref|XP_010933488.1|1.01E-180PREDICTED: acetylornithine deacetylase isoform X2 [Elaeis guineensis]
Swissprottr|Q9C5C4|ARGE_ARATH4.00E-167Acetylornithine deacetylase
trEMBLtr|W1PMP0|W1PMP0_AMBTC3.00E-177Uncharacterized protein {ECO:0000313|EMBL:ERN09318.1}
TAIRAT4G178302.00E-166Peptidase M20/M25/M40 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000574537687475777+
Transcript Sequence

Network for GWHGAAEX015718

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01546.27Peptidase_M2072834.30E-15
PF07687.13M20_dimer1012111.60E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01438argE Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of antibioticsmap01130
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Arginine biosynthesismap00220

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms75.930
SRR2545915Juvenile tuber50.650
SRP108465SRR5643513five period of Gastrodia elata45.200
SRR5643514five period of Gastrodia elata49.980
SRR5643515five period of Gastrodia elata40.120
SRR5643524five period of Gastrodia elata48.310
SRR5643525five period of Gastrodia elata54.870
SRR5643528five period of Gastrodia elata44.910
SRR5643658five period of Gastrodia elata63.440
SRR5643659five period of Gastrodia elata42.620
SRR5643660five period of Gastrodia elata45.530
SRR5643661five period of Gastrodia elata36.910
SRR5643662five period of Gastrodia elata45.150
SRR5643663five period of Gastrodia elata36.190
SRR5643664five period of Gastrodia elata38.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_147.270
SRR6049655Rhizomagastrodiae_C368-T10_good_119.860
SRR6049656Rhizomagastrodiae_C368-T07_good_142.280
SRR6049657Rhizomagastrodiae_C368-T07_good_152.750
SRR6049658Rhizomagastrodiae_C368-T04_good_140.880
SRR6049659Rhizomagastrodiae_C368-T04_good_148.520
SRR6049660Rhizomagastrodiae_C368-T01_good_142.110
SRR6049661Rhizomagastrodiae_C368-T04_good_140.180
SRR6049662Rhizomagastrodiae_C368-T01_good_128.130
SRR6049663Rhizomagastrodiae_C368-T01_good_136.740
SRR6049664Rhizomagastrodiae_C368-T10_good_139.940
SRR6049665Rhizomagastrodiae_C368-T10_good_139.940
SRP279888GastroGastrodia elata tuber 52.87
JuvenJuvenile tuber56.88
Mother_GastroMother tuber of Gastrodia elata 44.04
Mother_JuvenMother tuber of Juvenile 48.27