Detail information of GWHGAAEX015722/evm.TU.scaffold_7.179
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|478482554|ref|YP_007713204.1| | 3.00E-07 | hypothetical protein MMALV_05390 [Candidatus Methanomethylophilus alvus Mx1201] |
| nr | gi|695060645|ref|XP_009418721.1| | 0 | PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X2 [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|Q9LE59|GAUT1_ARATH | 0 | Polygalacturonate 4-alpha-galacturonosyltransferase |
| trEMBL | tr|M0U336|M0U336_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P24290_001} |
| TAIR | AT3G61130 | 0 | galacturonosyltransferase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 7897340 | 7924326 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015722
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01501.19 | Glyco_transf_8 | 338 | 653 | 5.70E-94 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K13648 | GAUT | Metabolic pathways | map01100 |
| Amino sugar and nucleotide sugar metabolism | map00520 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016757 | Molecular Function | transferase activity, transferring glycosyl groups |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 24.840 |
| SRR2545915 | Juvenile tuber | 29.640 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 27.280 |
| SRR5643514 | five period of Gastrodia elata | 26.680 | |
| SRR5643515 | five period of Gastrodia elata | 29.310 | |
| SRR5643524 | five period of Gastrodia elata | 28.470 | |
| SRR5643525 | five period of Gastrodia elata | 34.030 | |
| SRR5643528 | five period of Gastrodia elata | 37.420 | |
| SRR5643658 | five period of Gastrodia elata | 42.790 | |
| SRR5643659 | five period of Gastrodia elata | 28.500 | |
| SRR5643660 | five period of Gastrodia elata | 25.090 | |
| SRR5643661 | five period of Gastrodia elata | 27.130 | |
| SRR5643662 | five period of Gastrodia elata | 26.700 | |
| SRR5643663 | five period of Gastrodia elata | 26.870 | |
| SRR5643664 | five period of Gastrodia elata | 21.930 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 22.190 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 22.330 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 25.390 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.060 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 19.090 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 16.870 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 18.120 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 21.320 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 25.600 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 21.120 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 26.850 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 26.850 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 28.44 |
| Juven | Juvenile tuber | 22.39 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 29.17 | |
| Mother_Juven | Mother tuber of Juvenile | 30.99 |