Gene detail

Detail information of GWHGAAEX015733/evm.TU.scaffold_7.194

Functional Annotation

Database	Orthologs	Annotation
nr	gi\|743834660\|ref\|XP_010935594.1\|	PREDICTED: uncharacterized protein LOC105055471 [Elaeis guineensis]
trEMBL	tr\|M0TQ91\|M0TQ91_MUSAM	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P13880_001}
TAIR	AT5G23390	Plant protein of unknown function (DUF639)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	8574614	8615206	+

Transcript Sequence
>GWHTAAEX015733 TTAAATAAAAGCGATACTGAAGTGTTCATTTCGAAGATCCCAATCAGTACCGGAGAACTTTCCGGGAGCAATATTTTCGACCACTTTGGGAATGATGGATATGAATCGACGGATGGGGTTATCGGAGAGCTTCCGTCGGCAGCAGCTTTTCAAATCCTTATTTAACGGGAGGAGGAAAGCCAATCCCAATGATGAAGCCCCAAATCCTATTCCGCGCCTCTCCCCACTTGCGAATTCTGTCGTCTTTCGCTGTTCTAAGATCCTTCATATTTTGACAGAAAATTTACAGAAGTGTTTTGAGAACGAGCTTCCTGATCTTGCTTCTCAACCATGTTTGTATGCTAGAAATCTCTTAGAGTATTGTTCTTATAGAGCGCTCAATGTGATGATTAAACATTCCAATTACATGGATGATAAGGATTTCTGTCGCTTAACATTTGATATGATGCTTGCCTGGGAAGCTCCTGATACAGAGACTGAATCTTTACCAAAAGAGTCTTTTTCTATCAGTCATTCAAGAAATGAGGATGATAACGGGGGATCACTTTTCTATATAAACTCAACAAATTTAGCTGTTCAGGTGGATGAAAAAAGGTCTGTTGGACGTGAAGCTTTTTCTCGAATAGCCCCAGCATGTCCTGCTATAGCTGATTTGATCACCATTCACAACCTCTTTGATGCATTGACAAGTTTTTCTTGCAGGCGACTTCATTTTATTGTGTATGAGAAGTACCTTAAAGGGATAATTAAGGTGCTCAACTCAGCAAAGGGTCACATTGGGTCGCCACTTGCTTCAAACCTTCATCTTACTGATGGGGAAATTATATTAGACGTAGCTGGTGTTTTTCCCTCTCAGCCTGTTTTACAACACATTGGAATATCTGCTTGGCCTGGACGGCTGATACTGACCAATCACGCTCTTTACTTTGAGCCATTGGGAGTAGGGTCTTATGGTGAAGCTATTGTTTATGACCTAGCAAAGGACTTGAAGCAGATTGTAAAACCAGAATTGACTGGACCTTTGGGTGCACGGCTCTTTGATAAGGCAGTCATGTACAAGTCATCCACATTAACAGATCCGATTTATTTAGAGTTCCCGGAGTTTAAAGGACATTCTCGAAGAGATTACTGGCTGGCAATAGTTCAGGAAGTCTTGCATTCACATAGATTTATTAGAAAATATAATCTTATGGAGATTCAACGAGAAGAAGCACTTTCCAAGGCAACAATTGGCATCTTTCGGTATCGTGCTGTGAGAGAAGCTTTCCACATTAACCTATTGGATTTTAAGTCTATACTCATTTTTAATTTGGCAGAGAAATTGCCCAAAGGAGATATGATTCTTGAAGCTTTATCTAGCCACATTGAGCTTCTGCAATCCCAATCTGCACCGCATAATTGCACAAAGCTTAACTCTGATATAAGCCCTCATGTTTTATCTGTATCATCATACTCAATTTTTATAATGAGATTTAGATCTATGGAGGAGCTAGAAAGAAATGAAAAAAACTTCATGACTCCTCTTATCACCGTTGGTGAAATAACTTCTCTTGAGGTGGCTGTGAAAGATTCACATTGTAACTCAAAAAAGTTTGAGGCTGCAAATGCAACTGTTGATCAGGTGAAAATGGAAGGCATTGGAACAAACTTTGCTGCCATGCAGGAACTTCTCCATCCTCTGATTGAATTGGGCAAGCTGCTTGTTCTATTGGCTGAATGGGAGGAGCCTCCCAAGTCAGCTGCATTTATTGTTTTCCTTTTGTATATAGCTTATAGGGATTTAATCAAGTACTTGTTTCCTTCCATTTTCTTATATTTGGCGGCTCTCATGCTTTGGAACAAGTGTCGGAGCAAGGTACAACGAGTGAAAGCCTTTCAAGTCAATCTTCCTCTGAGAAAAAATGCAGTTGAACAACTTTTGAAATTGCAAGAAGCTATATCACAGTTAGAAGCTTACATCCAAATGGGGAACGTGATTCTTCTAAAGTTAAGATCTGTTTTGCTTGCAGCCGCTCCTCAGGCTACCGACAGAGTTGCAATTGCTCTGGTTTTAATGGCATCAGCAATCACATTTGTACCTTTGAAGCATCTTGTGGTGCTTATGCTACTTGACACATTCACACAAGCGATGCCTTTAAGAAAAAGTAGCAACGATAAGATCAAACGCAGGCTTAAGGAGTGGTGGGATCAAATTCCGGCAGCACCGGTTCAACTTGTCAGACCCCTCAGCACAGTTAAATCCCATAAATGAGCAAACAAGTTCTCTTTTTAGCTAAATTATCATTTGGTACCGGTTGATTTTTGAAAAATGGTCTTTCATTTATTTAAAATTGTCCAATTTAATCTCTTGACTATTAAAATGTCCAAAATAATCCTCAAAACTCTTTTTATAAGTACAAAATAGTCCTATTATTATTTTTTCTTCTGATCTGCTACCTTTTATATTTTTGAAATATTTTTAAACAACTATTTTTTAAAATTTTAATATCAAAACTTTTTATATGTATTTTGCCGAAGTCCTAAAATGCTCTTCATTAATTTTTTCATCCAAAATGAATGAAAAAATTAAATCAGGACTATTTTGGACGTTTAAAAAGAGTTGGAGGATTATTTTGGTATTTTAATAGTTGAGGGATTAAATTGAGCGTTTTTCAATAATCAAGAGATTATTTTGAGAAATAACTCTTGGTTTTTTATTCAATAGTTATACGGTCCCACAAAATAATTGTTTTAATATATAAGAGCTTACAACAAATGAGAATTAGTATTGGAATGTTGGAAATGAGGATTGTTATCATTGAGTAGCCTGTTAGAACTGGCTCTTTAGTAACTAAGACGAGAGAATGGAATATGGATGTGTCATACAACAGTATTACTTGTCTCTAGTTGAACTAGTGGTACATCTCATATAAATGCATTTTTTATTATTGCTATGACTAACATTCTATTTATGCATTCATTT

Network for GWHGAAEX015733

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF04842.11	DUF639	484	709	9.20E-61

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	20.150
SRP064423	SRR2545915	Juvenile tuber	15.440
SRP108465	SRR5643513	five period of Gastrodia elata	8.740
	SRR5643514	five period of Gastrodia elata	8.080
	SRR5643515	five period of Gastrodia elata	8.130
	SRR5643524	five period of Gastrodia elata	9.500
	SRR5643525	five period of Gastrodia elata	7.700
	SRR5643528	five period of Gastrodia elata	9.400
	SRR5643658	five period of Gastrodia elata	8.920
	SRR5643659	five period of Gastrodia elata	9.470
	SRR5643660	five period of Gastrodia elata	9.860
	SRR5643661	five period of Gastrodia elata	7.570
	SRR5643662	five period of Gastrodia elata	8.940
	SRR5643663	five period of Gastrodia elata	10.130
	SRR5643664	five period of Gastrodia elata	8.450
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	9.880
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	11.780
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.230
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.800
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.740
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	12.390
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.580
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.590
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.350
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.470
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	9.640
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	9.640
SRP279888	Gastro	Gastrodia elata tuber	8.74
	Juven	Juvenile tuber	7.80
	Mother_Gastro	Mother tuber of Gastrodia elata	7.35
	Mother_Juven	Mother tuber of Juvenile	8.75