Detail information of GWHGAAEX015741/evm.TU.scaffold_7.203
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|331698915|ref|YP_004335154.1| | 3.00E-22 | serine/threonine protein kinase [Pseudonocardia dioxanivorans CB1190] |
| nr | gi|743779311|ref|XP_010920120.1| | 0 | PREDICTED: probable receptor-like protein kinase At5g56460 isoform X2 [Elaeis guineensis] |
| Swissprot | tr|Q8RWW0|ALE2_ARATH | 2.00E-69 | Receptor-like serine/threonine-protein kinase ALE2 (Precursor) |
| trEMBL | tr|M0RWE7|M0RWE7_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P02390_001} |
| TAIR | AT1G77280 | 5.00E-120 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 9031710 | 9036880 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015741
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 132 | 346 | 3.40E-40 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VI |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.770 |
| SRR2545915 | Juvenile tuber | 5.860 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.350 |
| SRR5643514 | five period of Gastrodia elata | 17.950 | |
| SRR5643515 | five period of Gastrodia elata | 20.620 | |
| SRR5643524 | five period of Gastrodia elata | 21.780 | |
| SRR5643525 | five period of Gastrodia elata | 12.110 | |
| SRR5643528 | five period of Gastrodia elata | 44.940 | |
| SRR5643658 | five period of Gastrodia elata | 12.650 | |
| SRR5643659 | five period of Gastrodia elata | 11.550 | |
| SRR5643660 | five period of Gastrodia elata | 8.650 | |
| SRR5643661 | five period of Gastrodia elata | 8.980 | |
| SRR5643662 | five period of Gastrodia elata | 9.670 | |
| SRR5643663 | five period of Gastrodia elata | 5.010 | |
| SRR5643664 | five period of Gastrodia elata | 4.750 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.970 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.990 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 5.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.470 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.350 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 11.150 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.520 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.540 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.990 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 11.680 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 5.200 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 5.200 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.58 |
| Juven | Juvenile tuber | 9.08 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 69.59 | |
| Mother_Juven | Mother tuber of Juvenile | 71.04 |