Detail information of GWHGAAEX015747/evm.TU.scaffold_7.209
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG4471 | 0 | Phosphatidylinositol 3-phosphate 3-phosphatase myotubularin MTM1 |
| nr | gi|743764008|ref|XP_010912206.1| | 0 | PREDICTED: phosphatidylinositol-3-phosphatase myotubularin-1 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|F4J3T8|MYTM1_ARATH | 0 | Phosphatidylinositol-3-phosphatase myotubularin-1 |
| trEMBL | tr|F6I5V0|F6I5V0_VITVI | 0 | Putative uncharacterized protein {ECO:0000313|EMBL:CCB62318.1} |
| TAIR | AT5G04540 | 0 | Myotubularin-like phosphatases II superfamily |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 9186478 | 9310316 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015747
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF06602.13 | Myotub-related | 193 | 562 | 9.40E-127 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K18081 | MTMR1_2 | Metabolic pathways | map01100 |
| Inositol phosphate metabolism | map00562 | ||
| Phosphatidylinositol signaling system | map04070 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0016311 | Biological Process | dephosphorylation |
| GO:0004725 | Molecular Function | protein tyrosine phosphatase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.140 |
| SRR2545915 | Juvenile tuber | 17.760 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.400 |
| SRR5643514 | five period of Gastrodia elata | 12.360 | |
| SRR5643515 | five period of Gastrodia elata | 13.330 | |
| SRR5643524 | five period of Gastrodia elata | 11.300 | |
| SRR5643525 | five period of Gastrodia elata | 16.440 | |
| SRR5643528 | five period of Gastrodia elata | 15.730 | |
| SRR5643658 | five period of Gastrodia elata | 18.420 | |
| SRR5643659 | five period of Gastrodia elata | 15.080 | |
| SRR5643660 | five period of Gastrodia elata | 16.300 | |
| SRR5643661 | five period of Gastrodia elata | 14.100 | |
| SRR5643662 | five period of Gastrodia elata | 17.570 | |
| SRR5643663 | five period of Gastrodia elata | 16.130 | |
| SRR5643664 | five period of Gastrodia elata | 17.950 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 21.740 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.400 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.710 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 21.360 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.540 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 25.410 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 20.640 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.450 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 17.670 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 18.910 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 16.850 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 16.850 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 29.57 |
| Juven | Juvenile tuber | 19.45 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 25.55 | |
| Mother_Juven | Mother tuber of Juvenile | 25.70 |