Gene detail

Detail information of GWHGAAEX015753/evm.TU.scaffold_7.215

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG2417	Predicted G-protein coupled receptor
nr	gi\|720073843\|ref\|XP_010278836.1\|	PREDICTED: GPCR-type G protein 1 [Nelumbo nucifera]
Swissprot	tr\|Q9XIP7\|GTG1_ARATH	GPCR-type G protein 1
trEMBL	tr\|U5D5Q3\|U5D5Q3_AMBTC	Uncharacterized protein {ECO:0000313\|EMBL:ERN15678.1}
TAIR	AT1G64990	GPCR-type G protein 1

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	9437157	9492579	+

Transcript Sequence
>GWHTAAEX015753 ATGGTCTGGGGATGGAAGATCTACGAAGGCATGGTAGTGATCGGATCTCTAAGCCTTCTTGGCTGGGCAGGGCTCTGGTTTCTGAATCGCCGATTGTATAAAGAGTATGAGGAGAAGCGTGCCCTCGTTCAAATCCTCTTCAGTTTCGTCTTCTCATTCTCCTGTAACCTCTTTCAGTTAGTTCTTTTTGAGATTCTCTCCATCCTCTCCAAAGATGCAAGGTGGATAAATTGGAAGATCGATCTATTTTGTCTGATATTATTGCTGGTGTTTGTTTTGCCGTATTATCACTGCTATCTGATGCTGCGAAACAGTGGACTGAGGAACGAAAGGGCTGCATTTGGGGCAGTAATATTTTTATTGGCTTTTCTTTATGCTTTTTGGCGAATGGGGATTCACTTTCCTATGCCTTCTCCAGAGAAAGGATTTTTCACAATGCCTCAACTAGTTAGTAGAATTGGTGTAATTGGCGTCACTGTAATGGCTGTGCTATCTGGCTTTGGGGCGGTCAACCTGCCTTACAGCTATTTGTCCCTCTTTATCAGGGAGATTGAGGAGTCGGACATTAAAGCTTTGGAGCGGCGGTTAATGCAATCAATAGAGTTTTGCATTACAAAGAAGAAGAAGATCATTTTATCCCAAATGGAGATGGAGAGAATACAGGGATCAGAAGAGAAACTTAAAGCCAAATCTTTTCTTAGACGGCTCATTGCAGTGGTTCGATCTGGGCAGGAAGATCAAATGGAGCAAGATATTAAAAGCATGGAGGCAGAGGTGCATGCATCTGAAGAGCTTTCAAAACAGCTATTCCTAGAAATTTATGAGCTTCATCAAGCAAAGGAAGCTGCTGCCTTTTCTCGAACTTGGAGAGGACACCTGCAAAATTTATTAGGCTATATCTTATCAGTTTACTGTGTCTACAAAATGATTAAGGCTCTACAGAGCGTGGCGTTCAAGAAGGTTGGATCGGTTGATCCTGTGACGATGACCATCAGCATATTCTTAAAGAGCTTTGACATCGGCTTCAATGCCGCCCTTCTATCCCAATATGTTTCTCTGCTCTTCATTGGAATGCTGGTTGTCATCTCTGTTAGAGGCTTTCTATCAAATCTCATGAAGTTCTTCTTCGCCTTTTCGAGGGTTGGGAGTGGGACATCGACCAATGTTGTGCTTTTCATGTCCGAGATCATGGGCATGTATTTCGTGTCTTCCATCCTCTTGATAAGAAAAAGTTTAGCGAGCGACTACAGGATTATTATCACAGACGTTCTTGGGGGTGATGTCCAGTTCGATTTCTACCATCGTTGGTTTGATGCCATCTTTGTGGCCAGCGCTTTCCTTTCGTTGCTGCTGTTGATTTCGCAGCACAGGTCTCGCCAAGAAGACAAACACCCCGTTGATTAGATGACTGATTATGTAACAGCATGCCTTCTATCTATTATAAGTATAACCAACTTTAGTTTTCATCCAAATAATACACAAATAAAACTTTTACTTGATTTTGGCGTAAAAGAAATAAGAAAATATCCTGCACTTGCTACAGTAAGTTGGTGCTATTATACATAGATTTTTAAGAACAATATTACGGTACCTCGTCTAGCGTTTCAGTTATTTTTGTGTAATTAAATGTTTTAAGGATTTTGCTACACACTATTATATACACATTAAAATGAAGATGACGTTACAATCTTGTGTAGATATATGATTTGTATAATTTTCTTTTTGCTTGGATCGATCCGTAAGAAAATAAAGAAAAAAAT

Network for GWHGAAEX015753

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12537.7	GPHR_N	143	209	7.10E-23
PF12430.7	ABA_GPCR	285	456	3.70E-37

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016020	Cellular Component	membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	29.140
SRP064423	SRR2545915	Juvenile tuber	15.440
SRP108465	SRR5643513	five period of Gastrodia elata	13.570
	SRR5643514	five period of Gastrodia elata	11.800
	SRR5643515	five period of Gastrodia elata	13.670
	SRR5643524	five period of Gastrodia elata	12.510
	SRR5643525	five period of Gastrodia elata	30.110
	SRR5643528	five period of Gastrodia elata	31.510
	SRR5643658	five period of Gastrodia elata	26.870
	SRR5643659	five period of Gastrodia elata	12.780
	SRR5643660	five period of Gastrodia elata	14.440
	SRR5643661	five period of Gastrodia elata	14.050
	SRR5643662	five period of Gastrodia elata	15.270
	SRR5643663	five period of Gastrodia elata	15.030
	SRR5643664	five period of Gastrodia elata	12.500
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	14.080
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.900
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	12.900
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	14.270
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	17.990
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.970
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	14.270
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	15.720
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	13.940
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.250
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.980
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.980
SRP279888	Gastro	Gastrodia elata tuber	16.06
	Juven	Juvenile tuber	11.67
	Mother_Gastro	Mother tuber of Gastrodia elata	20.66
	Mother_Juven	Mother tuber of Juvenile	18.27