Gene detail

Detail information of GWHGAAEX015762/evm.TU.scaffold_7.227

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|148654940\|ref\|YP_001275145.1\|	1.00E-08	group 1 glycosyl transferase [Roseiflexus sp. RS-1]
nr	gi\|743775397\|ref\|XP_010918079.1\|	0	PREDICTED: probable methyltransferase PMT21 [Elaeis guineensis]
Swissprot	tr\|Q9C6S7\|PMTK_ARATH	0	Probable methyltransferase PMT20
trEMBL	tr\|M0SSL7\|M0SSL7_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P27550_001}
TAIR	AT1G31850	0	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	9760631	9785583	-

Transcript Sequence
>GWHTAAEX015762 ATAAGTTTGAACTATATGTATCTATCATATTCTTATTTGTGATTCTCCTTCTTATATATGGAATAGGTAATTAGTGAGAACCAATCCAAATTTTATTGCTAAATCATAGAAAATTCCAATCAAACCCTTCAAAACCGACCGACTACTTGTTTATATTACCATATTCAACGATGCGGCGTGGAGCAAAGACCAGAGCAGCTGCTAACTAGGAGGGCTATAAATGGTAGGCGAACTATAGATGCCAGTCAGGGACTCGAACTGGCTGTCCTGAGATCCAGTTCTCCATCATTCTGAAATCCATTTGTCGGTGCTAGAAGGGGAGATCCAGGCAGGTGATAGGGTTATATAAAAGATGAAGGGTAAAGATGCAAAGTCAGGAAGTATTGCTGAAAAAAATTCCAAGCCAGTTCCTATAATTATAATCTTTGTAGTGTCATGTGGATTTTCATTTTATCTTGGTGGCCTCTTTAATTTGGAGAAAAATAGCTTCCTCTCAAGTCGTTCAATTAGAACAGTAGTGAATCTAAAAGGAAGTGCAGTTGCTCCCCTTCAAACTGAGGCTCTTTCTTTGCGCGAATGTGGAATTGACTACCAAGATTACACACCATGCACGGACCCAAAGAGATGGAGGAGATATGGTAATTACAGACTCAACTTCATGGAACGCCATTGCCCACCAATGAATGAAAGGACAGACTGCCTGGTTCCCCCACCATCTGGTTATAAAATTCCAATCAGATGGCCACAAAGCAAAAATGAATGTTGGTATAGAAATGTGCCATATGATTGGATAAACAATCAGAAATCAAACCAACACTGGCTAAGAAAAGATGGTGAGAAGTTTCTTTTCCCTGGCGGAGGCACTATGTTCCCAAACGGGGTTAGTGAGTATGTTGACTTAATGGAAAATCTCATTCCTGAAATGAAGGATGGGACTGTCCGAACTGCCATTGATACGGGTTGTGGGGTTGCAAGTTGGGGTGGTGATTTGCTAGGCCGAGGAATTTTGACTCTTTCACTTGCGCCTAGAGATAATCATGAAGCTCAAGTGCAGTTTGCCCTTGAACGTGGAATCCCAGCTATTTTAGGGATCATATCTACACAGAGATTACCTTTTCCATCCAATTCTTTTGATATGGCTCACTGCTCCAGGTGTCTTATCCCGTGGACTGAATTTGATGGGCTTTATCTTCTGGAAATACACAGAATTCTCCGGCCCGGAGGATTCTGGGTGCTCTCTGGGCCTCCTGTGAACTATCAAAATCGTTGGCGAGGGTGGAACACAACGACAGCTGAGCAGAAAGCAGATTTTATCAAGTTAAAAAAGCTGCTGACGAGCATGTGCTTCAAATTGTATAATACCAAGGATGATATTGCTGTTTGGCAGAAGCTCTCAGAAGATCACATCTGCTACAATAGTTTAACTCTAACTTCCTATCCTCCTAAATGCGACGATAGCAGGGATCCTGACTCTGCATGGTACGTTCCGCTTCGGCCCTGCGTAACTGTACCGAACCCCAATTCGAAGAAGTTGGACCTGAAATCAATTCCAAAATGGCCGGAGCGTATAAATGTTGTCCAGCTCCATGCGGGAAATAGCATGTTAAAGCACGACCAAGCGAAATGGGTGGTCAGGATGAAACACTATCACAGACTGCTTCCAGTTCTAGGCAGTGATAAGATCAGAAATGTCATGGATATGAACACCCTTTACGGGGGATTTGCGGGGGCACTGATAAAGTCGCCCTTGTGGGTAATGAATGTCGTGTCGTCCTATGGCACGAATTCGCTTGGCATGATATATGACAGGGGATTGATTGGGACTTATCATGACTGGTGCGAGCCTTTCTCAACGTACCCTCGAACGTACGATCTTCTGCATCTGGATGGCTTGTTTACCGCCGAAAGCCACAGGTGTGAAATGAAGTACGTCCTAGTTGAGATGGATAGGATACTTCGGCCGAGTGGTCATGCGATCATTAGGGAGTCGGAGTACTTTGTGGATGCAATCTTGACAATAGGAAGAGGTATGAAATGGAATTGCGAGGCGAGAGACGCCGAGTATGGCGCTGGGAAGGAGAAACTTTTGATTTGCCACAAGAAGCTCTGGTTCTCAAGTATCACCCAATATTGATATGCCGGAAGAAGCTCTGGTTCTCTCTTACATTTTTTTCTTTTTATATTTCCTCTTGTGTACCTTTACATTTGAAGAGATTAAGATGTCTTTGAATACCGTAGCATTTTTTTTGTAATGAAGAAAAAATAAGTATTCCATTTTTTGAACCTACGGATGATGTATTGAGTTCGGTTCTATTGGAATTTAGTTAAGTCTTTTTTGTTGTTTGTGCGAACTGCCACAATATCTATTGTTTAGCCCGAAGTTTTTGAGATGATGGGACAATAAAACAAGTCGAGATGATTTTAGAAGGAATTTAGTTCTATGGGACAA

Network for GWHGAAEX015762

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module3

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03141.15	Methyltransf_29	82	583	9.10E-204

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008168	Molecular Function	methyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	48.680
SRP064423	SRR2545915	Juvenile tuber	138.550
SRP108465	SRR5643513	five period of Gastrodia elata	93.490
	SRR5643514	five period of Gastrodia elata	70.030
	SRR5643515	five period of Gastrodia elata	162.930
	SRR5643524	five period of Gastrodia elata	101.200
	SRR5643525	five period of Gastrodia elata	67.510
	SRR5643528	five period of Gastrodia elata	113.800
	SRR5643658	five period of Gastrodia elata	85.820
	SRR5643659	five period of Gastrodia elata	252.620
	SRR5643660	five period of Gastrodia elata	205.800
	SRR5643661	five period of Gastrodia elata	264.130
	SRR5643662	five period of Gastrodia elata	221.270
	SRR5643663	five period of Gastrodia elata	255.050
	SRR5643664	five period of Gastrodia elata	134.120
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	60.380
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	47.960
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	64.540
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	56.160
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	34.030
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.200
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	72.480
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	64.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	71.600
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	56.890
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	61.690
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	61.690
SRP279888	Gastro	Gastrodia elata tuber	120.83
	Juven	Juvenile tuber	56.50
	Mother_Gastro	Mother tuber of Gastrodia elata	64.54
	Mother_Juven	Mother tuber of Juvenile	84.64