Detail information of GWHGAAEX015768/evm.TU.scaffold_7.234


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|389865300|ref|YP_006367541.1|2.00E-35Aquaporin NIP1-1 [Modestobacter marinus]
KOGKOG02232.00E-49Aquaporin (major intrinsic protein family)
nrgi|357447033|ref|XP_003593792.1|3.84E-57Aquaporin NIP1-2 [Medicago truncatula]
Swissprottr|P49173|NIP1_NICAL3.00E-54Probable aquaporin NIP-type
trEMBLtr|G7ILL3|G7ILL3_MEDTR1.00E-57Major intrinsic protein (MIP) family transporter {ECO:0000313|EMBL:AES64043.1}
TAIRAT4G189102.00E-49NOD26-like intrinsic protein 1;2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000599014179902746-
Transcript Sequence

Network for GWHGAAEX015768

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP172292.80E-48
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.360
SRP108465SRR5643513five period of Gastrodia elata3.680
SRR5643514five period of Gastrodia elata0.780
SRR5643515five period of Gastrodia elata1.500
SRR5643524five period of Gastrodia elata0.090
SRR5643525five period of Gastrodia elata0.810
SRR5643528five period of Gastrodia elata0.350
SRR5643658five period of Gastrodia elata0.610
SRR5643659five period of Gastrodia elata0.090
SRR5643660five period of Gastrodia elata0.720
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.100
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.060
SRR6049655Rhizomagastrodiae_C368-T10_good_114.590
SRR6049656Rhizomagastrodiae_C368-T07_good_113.090
SRR6049657Rhizomagastrodiae_C368-T07_good_16.670
SRR6049658Rhizomagastrodiae_C368-T04_good_114.640
SRR6049659Rhizomagastrodiae_C368-T04_good_116.650
SRR6049660Rhizomagastrodiae_C368-T01_good_14.240
SRR6049661Rhizomagastrodiae_C368-T04_good_111.280
SRR6049662Rhizomagastrodiae_C368-T01_good_120.440
SRR6049663Rhizomagastrodiae_C368-T01_good_111.940
SRR6049664Rhizomagastrodiae_C368-T10_good_147.950
SRR6049665Rhizomagastrodiae_C368-T10_good_147.950
SRP279888GastroGastrodia elata tuber 0.27
JuvenJuvenile tuber0.35
Mother_GastroMother tuber of Gastrodia elata 0.70
Mother_JuvenMother tuber of Juvenile 0.76