Detail information of GWHGAAEX015780/evm.TU.scaffold_7.246
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|521462539|ref|YP_008149401.1| | 7.00E-23 | hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2] |
| KOG | KOG0658 | 0 | Glycogen synthase kinase-3 |
| nr | gi|743777646|ref|XP_010919259.1| | 0 | PREDICTED: shaggy-related protein kinase epsilon isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q96287|KSG8_ARATH | 0 | Shaggy-related protein kinase theta |
| trEMBL | tr|M0SFN9|M0SFN9_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P18230_001} |
| TAIR | AT4G00720 | 0 | shaggy-like protein kinase 32 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 10329164 | 10364376 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015780
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module6 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 142 | 426 | 2.40E-62 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_GSK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 80.500 |
| SRR2545915 | Juvenile tuber | 103.090 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 23.270 |
| SRR5643514 | five period of Gastrodia elata | 20.920 | |
| SRR5643515 | five period of Gastrodia elata | 22.660 | |
| SRR5643524 | five period of Gastrodia elata | 22.720 | |
| SRR5643525 | five period of Gastrodia elata | 29.130 | |
| SRR5643528 | five period of Gastrodia elata | 27.310 | |
| SRR5643658 | five period of Gastrodia elata | 25.300 | |
| SRR5643659 | five period of Gastrodia elata | 27.150 | |
| SRR5643660 | five period of Gastrodia elata | 31.180 | |
| SRR5643661 | five period of Gastrodia elata | 27.020 | |
| SRR5643662 | five period of Gastrodia elata | 25.570 | |
| SRR5643663 | five period of Gastrodia elata | 25.930 | |
| SRR5643664 | five period of Gastrodia elata | 22.880 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 46.530 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 28.470 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 41.600 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 66.480 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 79.020 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 93.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 64.750 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 71.130 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 33.960 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 42.060 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 27.480 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 27.480 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 36.35 |
| Juven | Juvenile tuber | 25.36 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 26.68 | |
| Mother_Juven | Mother tuber of Juvenile | 25.69 |