Detail information of GWHGAAEX015784/evm.TU.scaffold_7.250


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695021565|ref|XP_009397874.1|5.96E-132PREDICTED: transcription factor MYB1R1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q2V9B0|MY1R1_SOLTU1.00E-37Transcription factor MYB1R1
trEMBLtr|M0SSG1|M0SSG1_MUSAM2.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P26990_001}
TAIRAT5G473902.00E-108myb-like transcription factor family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000051047969810514376+
Transcript Sequence

Network for GWHGAAEX015784

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding911354.30E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB-related

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.050
SRR2545915Juvenile tuber10.820
SRP108465SRR5643513five period of Gastrodia elata29.670
SRR5643514five period of Gastrodia elata46.550
SRR5643515five period of Gastrodia elata30.870
SRR5643524five period of Gastrodia elata39.240
SRR5643525five period of Gastrodia elata47.510
SRR5643528five period of Gastrodia elata41.360
SRR5643658five period of Gastrodia elata50.840
SRR5643659five period of Gastrodia elata17.120
SRR5643660five period of Gastrodia elata16.250
SRR5643661five period of Gastrodia elata18.640
SRR5643662five period of Gastrodia elata17.800
SRR5643663five period of Gastrodia elata16.770
SRR5643664five period of Gastrodia elata20.780
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.190
SRR6049655Rhizomagastrodiae_C368-T10_good_128.580
SRR6049656Rhizomagastrodiae_C368-T07_good_124.510
SRR6049657Rhizomagastrodiae_C368-T07_good_124.740
SRR6049658Rhizomagastrodiae_C368-T04_good_124.480
SRR6049659Rhizomagastrodiae_C368-T04_good_124.790
SRR6049660Rhizomagastrodiae_C368-T01_good_126.970
SRR6049661Rhizomagastrodiae_C368-T04_good_118.020
SRR6049662Rhizomagastrodiae_C368-T01_good_144.080
SRR6049663Rhizomagastrodiae_C368-T01_good_139.070
SRR6049664Rhizomagastrodiae_C368-T10_good_133.080
SRR6049665Rhizomagastrodiae_C368-T10_good_133.080
SRP279888GastroGastrodia elata tuber 16.63
JuvenJuvenile tuber20.50
Mother_GastroMother tuber of Gastrodia elata 30.99
Mother_JuvenMother tuber of Juvenile 25.91