Detail information of GWHGAAEX015785/evm.TU.scaffold_7.251
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|225851373|ref|YP_002731607.1| | 9.00E-52 | chaperone protein DnaJ [Persephonella marina EX-H1] |
| KOG | KOG0712 | 0 | Molecular chaperone (DnaJ superfamily) |
| nr | gi|720099684|ref|XP_010248011.1| | 0 | PREDICTED: dnaJ protein homolog 2-like [Nelumbo nucifera] |
| Swissprot | tr|Q04960|DNJH_CUCSA | 0 | DnaJ protein homolog (Precursor) |
| trEMBL | tr|W9QHL5|W9QHL5_9ROSA | 0 | DnaJ-like protein {ECO:0000313|EMBL:EXB37606.1} |
| TAIR | AT3G44110 | 0 | DNAJ homologue 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 10520718 | 10533664 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015785
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module8 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00226.30 | DnaJ | 14 | 71 | 2.90E-22 |
| PF01556.17 | DnaJ_C | 121 | 342 | 2.00E-39 |
| PF00684.18 | DnaJ_CXXCXGXG | 147 | 213 | 2.30E-13 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09503 | DNAJA2 | Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006457 | Biological Process | protein folding |
| GO:0009408 | Biological Process | response to heat |
| GO:0031072 | Molecular Function | heat shock protein binding |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0051082 | Molecular Function | unfolded protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2452.840 |
| SRR2545915 | Juvenile tuber | 1908.830 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 446.950 |
| SRR5643514 | five period of Gastrodia elata | 402.330 | |
| SRR5643515 | five period of Gastrodia elata | 441.100 | |
| SRR5643524 | five period of Gastrodia elata | 399.670 | |
| SRR5643525 | five period of Gastrodia elata | 1038.700 | |
| SRR5643528 | five period of Gastrodia elata | 647.630 | |
| SRR5643658 | five period of Gastrodia elata | 733.240 | |
| SRR5643659 | five period of Gastrodia elata | 972.400 | |
| SRR5643660 | five period of Gastrodia elata | 1220.170 | |
| SRR5643661 | five period of Gastrodia elata | 1142.280 | |
| SRR5643662 | five period of Gastrodia elata | 1534.080 | |
| SRR5643663 | five period of Gastrodia elata | 1275.640 | |
| SRR5643664 | five period of Gastrodia elata | 1868.880 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 924.530 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 552.270 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 745.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 1219.120 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 1674.240 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2144.320 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 1233.390 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 1454.560 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 668.780 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 1086.470 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 529.450 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 529.450 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1,556.92 |
| Juven | Juvenile tuber | 609.98 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 526.42 | |
| Mother_Juven | Mother tuber of Juvenile | 552.37 |