Detail information of GWHGAAEX015790/evm.TU.scaffold_7.257


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|338175136|ref|YP_004651946.1|0asparaginyl-tRNA synthetase [Parachlamydia acanthamoebae UV-7]
KOGKOG05540Asparaginyl-tRNA synthetase (mitochondrial)
nrgi|743827750|ref|XP_010933671.1|0PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial [Elaeis guineensis]
Swissprottr|O48593|SYNO_ARATH0Asparagine--tRNA ligase, chloroplastic/mitochondrial (Precursor)
trEMBLtr|B9HH41|B9HH41_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEE90248.2}
TAIRAT4G173000Class II aminoacyl-tRNA and biotin synthetases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000051067540710734787-
Transcript Sequence

Network for GWHGAAEX015790

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01336.24tRNA_anti-codon1262026.40E-08
PF00152.19tRNA-synt_22235752.20E-81
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01893NARS, asnS Aminoacyl-tRNA biosynthesis map00970

Gene Ontology

GO term OntologyName
GO:0006418Biological ProcesstRNA aminoacylation for protein translation
GO:0006421Biological Processasparaginyl-tRNA aminoacylation
GO:0005524Molecular FunctionATP binding
GO:0004816Molecular Functionasparagine-tRNA ligase activity
GO:0004812Molecular Functionaminoacyl-tRNA ligase activity
GO:0003676Molecular Functionnucleic acid binding
GO:0000166Molecular Functionnucleotide binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.970
SRR2545915Juvenile tuber8.000
SRP108465SRR5643513five period of Gastrodia elata6.750
SRR5643514five period of Gastrodia elata6.290
SRR5643515five period of Gastrodia elata7.280
SRR5643524five period of Gastrodia elata6.820
SRR5643525five period of Gastrodia elata8.490
SRR5643528five period of Gastrodia elata6.400
SRR5643658five period of Gastrodia elata6.870
SRR5643659five period of Gastrodia elata7.090
SRR5643660five period of Gastrodia elata10.020
SRR5643661five period of Gastrodia elata7.520
SRR5643662five period of Gastrodia elata8.860
SRR5643663five period of Gastrodia elata8.900
SRR5643664five period of Gastrodia elata8.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.150
SRR6049655Rhizomagastrodiae_C368-T10_good_19.840
SRR6049656Rhizomagastrodiae_C368-T07_good_17.830
SRR6049657Rhizomagastrodiae_C368-T07_good_17.210
SRR6049658Rhizomagastrodiae_C368-T04_good_17.530
SRR6049659Rhizomagastrodiae_C368-T04_good_16.740
SRR6049660Rhizomagastrodiae_C368-T01_good_17.100
SRR6049661Rhizomagastrodiae_C368-T04_good_18.120
SRR6049662Rhizomagastrodiae_C368-T01_good_16.690
SRR6049663Rhizomagastrodiae_C368-T01_good_16.550
SRR6049664Rhizomagastrodiae_C368-T10_good_17.970
SRR6049665Rhizomagastrodiae_C368-T10_good_17.970
SRP279888GastroGastrodia elata tuber 9.90
JuvenJuvenile tuber12.26
Mother_GastroMother tuber of Gastrodia elata 4.02
Mother_JuvenMother tuber of Juvenile 5.82