Detail information of GWHGAAEX015800/evm.TU.scaffold_7.267


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743832413|ref|XP_010934970.1|0PREDICTED: scarecrow-like protein 27 [Elaeis guineensis]
Swissprottr|O81316|SCL6_ARATH4.00E-107Scarecrow-like protein 6
trEMBLtr|M0TPG9|M0TPG9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P11160_001}
TAIRAT4G001501.00E-106GRAS family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000051111663011118531-
Transcript Sequence

Network for GWHGAAEX015800

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.13GRAS2696321.30E-81
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.920
SRR2545915Juvenile tuber20.180
SRP108465SRR5643513five period of Gastrodia elata47.150
SRR5643514five period of Gastrodia elata39.600
SRR5643515five period of Gastrodia elata31.640
SRR5643524five period of Gastrodia elata37.070
SRR5643525five period of Gastrodia elata86.090
SRR5643528five period of Gastrodia elata62.600
SRR5643658five period of Gastrodia elata45.670
SRR5643659five period of Gastrodia elata29.560
SRR5643660five period of Gastrodia elata36.530
SRR5643661five period of Gastrodia elata30.490
SRR5643662five period of Gastrodia elata18.970
SRR5643663five period of Gastrodia elata17.570
SRR5643664five period of Gastrodia elata21.020
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1104.650
SRR6049655Rhizomagastrodiae_C368-T10_good_1101.980
SRR6049656Rhizomagastrodiae_C368-T07_good_181.380
SRR6049657Rhizomagastrodiae_C368-T07_good_1107.870
SRR6049658Rhizomagastrodiae_C368-T04_good_191.730
SRR6049659Rhizomagastrodiae_C368-T04_good_1115.680
SRR6049660Rhizomagastrodiae_C368-T01_good_193.210
SRR6049661Rhizomagastrodiae_C368-T04_good_179.210
SRR6049662Rhizomagastrodiae_C368-T01_good_167.250
SRR6049663Rhizomagastrodiae_C368-T01_good_164.600
SRR6049664Rhizomagastrodiae_C368-T10_good_179.820
SRR6049665Rhizomagastrodiae_C368-T10_good_179.820
SRP279888GastroGastrodia elata tuber 19.35
JuvenJuvenile tuber101.18
Mother_GastroMother tuber of Gastrodia elata 22.42
Mother_JuvenMother tuber of Juvenile 33.02