Detail information of GWHGAAEX015804/evm.TU.scaffold_7.272
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|16273149|ref|NP_439386.1| | 2.00E-58 | adenine phosphoribosyltransferase [Haemophilus influenzae Rd KW20] |
| KOG | KOG1712 | 1.00E-96 | Adenine phosphoribosyl transferases |
| nr | gi|672127075|ref|XP_008786997.1| | 1.99E-112 | PREDICTED: adenine phosphoribosyltransferase 1 [Phoenix dactylifera] |
| Swissprot | tr|Q9SUW2|APT3_ARATH | 3.00E-97 | Adenine phosphoribosyltransferase 3 |
| trEMBL | tr|B9N3Q8|B9N3Q8_POPTR | 2.00E-108 | MtN30 family protein {ECO:0000313|EMBL:ERP64753.1} |
| TAIR | AT4G22570 | 1.00E-96 | adenine phosphoribosyl transferase 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 11256944 | 11266423 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015804
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00156.26 | Pribosyltran | 59 | 166 | 1.40E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00759 | APRT, apt | Metabolic pathways | map01100 |
| Purine metabolism | map00230 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009116 | Biological Process | nucleoside metabolic process |
| GO:0006168 | Biological Process | adenine salvage |
| GO:0003999 | Molecular Function | adenine phosphoribosyltransferase activity |
| GO:0005737 | Cellular Component | cytoplasm |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.030 |
| SRR2545915 | Juvenile tuber | 6.220 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.170 |
| SRR5643514 | five period of Gastrodia elata | 18.290 | |
| SRR5643515 | five period of Gastrodia elata | 8.950 | |
| SRR5643524 | five period of Gastrodia elata | 13.470 | |
| SRR5643525 | five period of Gastrodia elata | 0.870 | |
| SRR5643528 | five period of Gastrodia elata | 0.190 | |
| SRR5643658 | five period of Gastrodia elata | 0.150 | |
| SRR5643659 | five period of Gastrodia elata | 7.220 | |
| SRR5643660 | five period of Gastrodia elata | 4.450 | |
| SRR5643661 | five period of Gastrodia elata | 3.480 | |
| SRR5643662 | five period of Gastrodia elata | 3.990 | |
| SRR5643663 | five period of Gastrodia elata | 2.790 | |
| SRR5643664 | five period of Gastrodia elata | 3.280 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 12.910 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.800 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 17.820 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 8.040 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 9.300 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.440 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 16.260 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.110 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 49.430 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.950 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 31.620 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 31.620 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.31 |
| Juven | Juvenile tuber | 6.07 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 1.94 | |
| Mother_Juven | Mother tuber of Juvenile | 0.97 |