Detail information of GWHGAAEX015815/evm.TU.scaffold_7.282
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|383765359|ref|YP_005444340.1| | 3.00E-142 | anthranilate synthase component I [Phycisphaera mikurensis NBRC 102666] |
| KOG | KOG1223 | 0 | Isochorismate synthase |
| nr | gi|695056779|ref|XP_009416627.1| | 0 | PREDICTED: anthranilate synthase alpha subunit 1, chloroplastic-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|A2XNK3|ASA1_ORYSI | 0 | Anthranilate synthase alpha subunit 1, chloroplastic (Precursor) |
| trEMBL | tr|M0TYC8|M0TYC8_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P07690_001} |
| TAIR | AT2G29690 | 0 | anthranilate synthase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000005 | 11633619 | 11669780 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015815
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF04715.12 | Anth_synt_I_N | 95 | 249 | 2.30E-27 |
| PF00425.17 | Chorismate_bind | 310 | 582 | 1.30E-82 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009058 | Biological Process | biosynthetic process |
| GO:0000162 | Biological Process | tryptophan biosynthetic process |
| GO:0004049 | Molecular Function | anthranilate synthase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 6.430 |
| SRR2545915 | Juvenile tuber | 15.520 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.750 |
| SRR5643514 | five period of Gastrodia elata | 11.660 | |
| SRR5643515 | five period of Gastrodia elata | 10.050 | |
| SRR5643524 | five period of Gastrodia elata | 10.120 | |
| SRR5643525 | five period of Gastrodia elata | 8.680 | |
| SRR5643528 | five period of Gastrodia elata | 6.200 | |
| SRR5643658 | five period of Gastrodia elata | 9.480 | |
| SRR5643659 | five period of Gastrodia elata | 10.860 | |
| SRR5643660 | five period of Gastrodia elata | 13.000 | |
| SRR5643661 | five period of Gastrodia elata | 11.410 | |
| SRR5643662 | five period of Gastrodia elata | 8.620 | |
| SRR5643663 | five period of Gastrodia elata | 11.930 | |
| SRR5643664 | five period of Gastrodia elata | 10.960 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 18.740 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.830 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.180 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.460 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.590 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 9.530 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 7.330 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 10.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.030 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.270 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 21.920 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 21.920 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 9.01 |
| Juven | Juvenile tuber | 5.72 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.54 | |
| Mother_Juven | Mother tuber of Juvenile | 10.51 |