Detail information of GWHGAAEX015834/evm.TU.scaffold_7.306


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47953.00E-72Protein associated with transcriptional elongation factor ELL
nrgi|672160224|ref|XP_008799888.1|2.49E-102PREDICTED: ELL-associated factor 1 [Phoenix dactylifera]
trEMBLtr|M0TVB2|M0TVB2_MUSAM5.00E-95Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P31600_001}
TAIRAT1G710803.00E-72RNA polymerase II transcription elongation factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000051193304811966316-
Transcript Sequence

Network for GWHGAAEX015834

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09816.8EAF1572543.80E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.270
SRR2545915Juvenile tuber10.830
SRP108465SRR5643513five period of Gastrodia elata7.530
SRR5643514five period of Gastrodia elata6.660
SRR5643515five period of Gastrodia elata7.140
SRR5643524five period of Gastrodia elata5.830
SRR5643525five period of Gastrodia elata10.170
SRR5643528five period of Gastrodia elata12.450
SRR5643658five period of Gastrodia elata12.920
SRR5643659five period of Gastrodia elata8.600
SRR5643660five period of Gastrodia elata12.420
SRR5643661five period of Gastrodia elata11.010
SRR5643662five period of Gastrodia elata12.200
SRR5643663five period of Gastrodia elata11.200
SRR5643664five period of Gastrodia elata14.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.400
SRR6049655Rhizomagastrodiae_C368-T10_good_110.880
SRR6049656Rhizomagastrodiae_C368-T07_good_18.810
SRR6049657Rhizomagastrodiae_C368-T07_good_113.110
SRR6049658Rhizomagastrodiae_C368-T04_good_115.700
SRR6049659Rhizomagastrodiae_C368-T04_good_117.960
SRR6049660Rhizomagastrodiae_C368-T01_good_114.280
SRR6049661Rhizomagastrodiae_C368-T04_good_112.040
SRR6049662Rhizomagastrodiae_C368-T01_good_17.470
SRR6049663Rhizomagastrodiae_C368-T01_good_19.270
SRR6049664Rhizomagastrodiae_C368-T10_good_17.270
SRR6049665Rhizomagastrodiae_C368-T10_good_17.270
SRP279888GastroGastrodia elata tuber 12.12
JuvenJuvenile tuber10.40
Mother_GastroMother tuber of Gastrodia elata 12.84
Mother_JuvenMother tuber of Juvenile 10.90