Gene detail

Detail information of GWHGAAEX015835/evm.TU.scaffold_7.307

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|167629303\|ref\|YP_001679802.1\|	4.00E-64	hexokinase [Heliobacterium modesticaldum Ice1]
KOG	KOG1369	0	Hexokinase
nr	gi\|743756115\|ref\|XP_010915190.1\|	0	PREDICTED: hexokinase-2-like [Elaeis guineensis]
Swissprot	tr\|Q9SEK2\|HXK1_TOBAC	0	Hexokinase-1
trEMBL	tr\|V4UJX0\|V4UJX0_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR64550.1}
TAIR	AT2G19860	0	hexokinase 2

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000005	12019546	12048305	-

Transcript Sequence
>GWHTAAEX015835 ATGAGGAAGGCGGTGTTGGGAACGGCGGTGGTGTGTGCGGCGACGGCCTGCGCTGTTGCAGCGCTGATCTTGAAGCGTCGAATGAGGAATTCGGGGCGTTGGGCGAAGGTGGCTGCGATCGTGAAGGACCTCGAGGAGAAGTGCGAGGCGCCGATTGAGAAACTGCAGCAGGTCGCAGACGCCATGACGGTGGAGATGCACGCTGGACTTGTGTCAGAGGGCGGGAGCAAACTCAAGATGCTTATCACATACGTAGATAATCTACCTACCGGGGATGAGAAAGGGTTGTTTTATGCATTGGACCTTGGTGGAACTAACTTCCGTGTTATACGGGTACAGTTGGGAGGAAAGGAGCAAGGTGTTGTGAGACAGGAGGCTGAAGAGGTTTCTATTCCACCTCATTTGATGGTTGGGAGCTCCCATGAACTATTTGATTTCATCGCTGCAGGTGTAGCAAGGTTCATTGCTACTGAAAATGAGGACTTTCAGATTCCTCCTGGCAGGCAGAGAGAACTTGGTTTTACTTTCTCTTTCCCAGTGAGACAAACTTCACTTGCTTCAGGCACTCTTATTAAATGGACAAAAGGATTTTCCATTGAAGAAACGGTTGGGGAAGATGTTGTTACCGAGTTGACAAGGGCCTTTGAGAGACAGAATCTTGATTTGCATGTCGCTGCACTAGTGAATGATACTGTTGGAACGCTTGCTGGGGGAAGGTTTTATGATAAGGATGTCATTGTAGCTGTCATATTGGGTACTGGTACAAATGCAGCATATGTAGAGCGTGCACATGCTATTCCAAAGTGGCAAGGCCTACTACCAAAATCGGGAGAGATGGTCATCAACATGGAATGGGGAAATTTTCGGTCATCCCTCCTTCCCATGACAGAATATGATCAATCATTAGATGCTGAAAGTTTGAACCCTGGTGAGCAGATGTTTGAGAAGTTAATTTCGGGAATGTATTTGGGAGAGATTCTAAGAAGAGTTCTGTTGAAGTTAGCAGAAGAGGCTTCATTCTTTGGGGATGTTGTCCCTCCAAAACTTAATATTCCGTTTATACTGCGAACTCCGCACATGTCCTCGATGCATCACGACACCTCATCAGATCTGAGAATAGTTGCGAGCAAGATGAAGGATGTATTGGGGATCGCAAATACCTCCTTCAAGGCGCGGAAGACGGTGGCGGAGCTCTGCGACATTATCACGAAGCGAGGTGCACGGCTGTCGGCGGCGGGGATCGTCGGCATTCTGAAGAAGCAGGGAAGGGATGCTGCGGGGACGAAGAGAACAGTGATCGCTCTGGACGGCGGCCTTTTCGAACACTACACCTTGTTCAGGCAGTACCTGGAGAGCTCGCTATCGGAGATTCTCGGCTTGGAAGCTGCGTCCTCTGTGGTTATCATCCACGCCAACGACGGCTCCGGCATCGGCGCCGCTCTGCTTGCCGCATCCAACTCCCAGTATTCTGACTTGGAGGCTTCTTAGAAGAAGAAGCTTCCCATACCCGCCATTATTTTTTGCGAGGAAGCTTCGCTTTCTGTTTTTGTGAAATAAAGTAGGCTCCCAGCCTGCTGCTGTTCGATACCGTTACCTTATATTCCTTTTTTATGTTGAAGTGTATTTTAGAGGTGGACTGCTATAATCTCTCTCTCTCTCT

Network for GWHGAAEX015835

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00349.20	Hexokinase_1	41	237	3.70E-64
PF03727.15	Hexokinase_2	247	484	5.00E-81

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00844	HK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Biosynthesis of antibiotics	map01130
		Carbon metabolism	map01200
		Glycolysis / Gluconeogenesis	map00010
		Fructose and mannose metabolism	map00051
		Galactose metabolism	map00052
		Starch and sucrose metabolism	map00500
		Amino sugar and nucleotide sugar metabolism	map00520
		Streptomycin biosynthesis	map00521
		HIF-1 signaling pathway	map04066
		Insulin signaling pathway	map04910
		Carbohydrate digestion and absorption	map04973

Gene Ontology

GO term	Ontology	Name
GO:0005975	Biological Process	carbohydrate metabolic process
GO:0001678	Biological Process	cellular glucose homeostasis
GO:0005536	Molecular Function	glucose binding
GO:0005524	Molecular Function	ATP binding
GO:0004396	Molecular Function	hexokinase activity
GO:0016773	Molecular Function	phosphotransferase activity, alcohol group as acceptor

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	63.580
SRP064423	SRR2545915	Juvenile tuber	70.410
SRP108465	SRR5643513	five period of Gastrodia elata	65.410
	SRR5643514	five period of Gastrodia elata	71.970
	SRR5643515	five period of Gastrodia elata	60.480
	SRR5643524	five period of Gastrodia elata	63.640
	SRR5643525	five period of Gastrodia elata	84.770
	SRR5643528	five period of Gastrodia elata	87.960
	SRR5643658	five period of Gastrodia elata	81.210
	SRR5643659	five period of Gastrodia elata	77.710
	SRR5643660	five period of Gastrodia elata	80.760
	SRR5643661	five period of Gastrodia elata	81.650
	SRR5643662	five period of Gastrodia elata	83.610
	SRR5643663	five period of Gastrodia elata	87.490
	SRR5643664	five period of Gastrodia elata	94.910
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	89.340
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	72.150
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	94.400
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	78.050
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	94.460
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	81.300
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	81.730
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	79.840
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	122.810
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	108.360
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	110.040
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	110.040
SRP279888	Gastro	Gastrodia elata tuber	99.50
	Juven	Juvenile tuber	48.85
	Mother_Gastro	Mother tuber of Gastrodia elata	46.76
	Mother_Juven	Mother tuber of Juvenile	43.95